SYGB_DICNV
ID SYGB_DICNV Reviewed; 689 AA.
AC A5EV43;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 12-JUN-2007, sequence version 1.
DT 25-MAY-2022, entry version 77.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=DNO_0702;
OS Dichelobacter nodosus (strain VCS1703A).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales;
OC Cardiobacteriaceae; Dichelobacter.
OX NCBI_TaxID=246195;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VCS1703A;
RX PubMed=17468768; DOI=10.1038/nbt1302;
RA Myers G.S.A., Parker D., Al-Hasani K., Kennan R.M., Seemann T., Ren Q.,
RA Badger J.H., Selengut J.D., Deboy R.T., Tettelin H., Boyce J.D.,
RA McCarl V.P., Han X., Nelson W.C., Madupu R., Mohamoud Y., Holley T.,
RA Fedorova N., Khouri H., Bottomley S.P., Whittington R.J., Adler B.,
RA Songer J.G., Rood J.I., Paulsen I.T.;
RT "Genome sequence and identification of candidate vaccine antigens from the
RT animal pathogen Dichelobacter nodosus.";
RL Nat. Biotechnol. 25:569-575(2007).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR EMBL; CP000513; ABQ13623.1; -; Genomic_DNA.
DR RefSeq; WP_012031035.1; NC_009446.1.
DR AlphaFoldDB; A5EV43; -.
DR SMR; A5EV43; -.
DR STRING; 246195.DNO_0702; -.
DR EnsemblBacteria; ABQ13623; ABQ13623; DNO_0702.
DR KEGG; dno:DNO_0702; -.
DR eggNOG; COG0751; Bacteria.
DR HOGENOM; CLU_007220_2_2_6; -.
DR OMA; LPIPKRM; -.
DR OrthoDB; 213210at2; -.
DR Proteomes; UP000000248; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR SMART; SM00836; DALR_1; 1.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..689
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_1000101274"
SQ SEQUENCE 689 AA; 76777 MW; 040939AF93ED27A1 CRC64;
MNTVTLLIEI GTEELPTRAV TELASAGAQL WDNVLTTALI PHGEIEAFGT PRRLAWRVRQ
LAVKQTDQKI ERKGPSLQAA KDKNNAWTKA ALGFAASCGV DVEQLAIETT EKGQWLIFRG
EKMGENVADL LPDLFAEVMD KLPIAKRMRW GDCDHAFVRP VHNLLVLADD NVWDLEFFGV
ASQHLSQGHR VHHAEPVAIR HAKTYEADLE AAYVIVDHET RCNRIREQVQ ALARDLGGKA
LMPEALVKEV ASLTEWPIAI AGAFDRSFLK MPPEVLITTM QDHQKTFAVM DTLGTLLPYF
IAVANLESRN EEEVRKGNEK VIRPRFADAE FFWQQDLKRP LEDYLPQLER VIYQEKLGTL
AEKTRRVQTI ACELTAMTAA DKNSVYTAAR LAKSDLQTAM VQEFPELQGV MGRYYALHQG
LSAEVAQALE EQYFPTAAGD KLPQTAVGIT LSIAEKLDTL IGGFSIGAQP TGSKDPYALR
RMAIGLIRLL IEKKVPLLLT PWLEKAAGQF HDALGAKNFV MDVRAYILER LQAYYREQNI
APEIVQAVLA LNGDNLVDID QRVRALAPFS NSDAALSFFA SAKRIRNILK KNGTQQTAVR
TDLLQESAEK HLWQQWEQMH NALLAAVSAG NYETALQQLG SLAEPLEAFF AQVMVMTENP
DVQINRLALL TALQKGFELI ADLSIISNL