SYGB_GEODF
ID SYGB_GEODF Reviewed; 687 AA.
AC B9M5V4;
DT 28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT 24-MAR-2009, sequence version 1.
DT 25-MAY-2022, entry version 63.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=Geob_1577;
OS Geotalea daltonii (strain DSM 22248 / JCM 15807 / FRC-32) (Geobacter
OS daltonii).
OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales;
OC Geobacteraceae; Geotalea.
OX NCBI_TaxID=316067;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 22248 / JCM 15807 / FRC-32;
RG US DOE Joint Genome Institute;
RA Lucas S., Copeland A., Lapidus A., Glavina del Rio T., Dalin E., Tice H.,
RA Bruce D., Goodwin L., Pitluck S., Saunders E., Brettin T., Detter J.C.,
RA Han C., Larimer F., Land M., Hauser L., Kyrpides N., Ovchinnikova G.,
RA Kostka J., Richardson P.;
RT "Complete sequence of Geobacter sp. FRC-32.";
RL Submitted (JAN-2009) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR EMBL; CP001390; ACM19935.1; -; Genomic_DNA.
DR RefSeq; WP_012646664.1; NC_011979.1.
DR AlphaFoldDB; B9M5V4; -.
DR SMR; B9M5V4; -.
DR STRING; 316067.Geob_1577; -.
DR PRIDE; B9M5V4; -.
DR EnsemblBacteria; ACM19935; ACM19935; Geob_1577.
DR KEGG; geo:Geob_1577; -.
DR eggNOG; COG0751; Bacteria.
DR HOGENOM; CLU_007220_2_2_7; -.
DR OMA; LPIPKRM; -.
DR OrthoDB; 213210at2; -.
DR Proteomes; UP000007721; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..687
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_1000197201"
SQ SEQUENCE 687 AA; 75505 MW; CE9FFDA1B3ED00EE CRC64;
MAKELFLEIG TEEIPAGFLP KAMADMEGLI RKELESARIG FGEVKTMATP RRLALVVKNV
SAQQTDAEIT TMGPAKKVAF NDDGTTTKAG EGFARGQGVD ASALSIIATE KGEYVAVTKK
EIGVATAGLL AEILPRLINN IPFKKSMRWG DQEVRFARPM HWIVALFDGT VIPFAFGNVQ
SGSMSRGHRF MANTSFPVRD FGHYLEECER HFVIPDPAKR KEIISREIER VAKAAGGNVL
PDEGLLEQVT YLVEYPSAVH GTFSAEFLAV PKEVLITSMR EHQRYFSLVD DKGKLLPGFI
TINNTLTEDP SVVVKGNEMV LRARLSDARF FFEEDKKVPL EKRVEALKSV LYQAKLGTSY
EKMERFRTLA EGLAEQLQPP LKAKVFQAAT LCKADLVTGM VGEFPEVQGI MGREYALLQG
VDAEVARAIA EHYLPNQAGG ELPASDTGAF VSIADKVDTI CGCFSVGLIP SGSADPYALR
RAALGIINII LAKGYNLPLI PLVTKAIGQL EGRLTRKKEE VLADVLDFFK GRFINLLTDR
FPADVVEAVV AVSFDNLVEA TAKIEALAQF KKRDDFEPLA VAFKRVCNIV KEQVTVPVDD
KLFQDAAEGT LFQSFKSASS MVEEKVVQRE YLAALTQIAS LKGAVDDFFD KVMVMAEDEG
VRNNRLALLQ EIKSLFRDIA DFGKLTA