ID   SYGB_IDILO              Reviewed;         688 AA.
AC   Q5QY35;
DT   15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT   04-JAN-2005, sequence version 1.
DT   25-MAY-2022, entry version 117.
DE   RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE            EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE   AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE            Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN   Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=IL0005;
OS   Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR).
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales;
OC   Idiomarinaceae; Idiomarina.
OX   NCBI_TaxID=283942;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-735 / DSM 15497 / L2-TR;
RX   PubMed=15596722; DOI=10.1073/pnas.0407638102;
RA   Hou S., Saw J.H., Lee K.S., Freitas T.A., Belisle C., Kawarabayasi Y.,
RA   Donachie S.P., Pikina A., Galperin M.Y., Koonin E.V., Makarova K.S.,
RA   Omelchenko M.V., Sorokin A., Wolf Y.I., Li Q.X., Keum Y.S., Campbell S.,
RA   Denery J., Aizawa S., Shibata S., Malahoff A., Alam M.;
RT   "Genome sequence of the deep-sea gamma-proteobacterium Idiomarina
RT   loihiensis reveals amino acid fermentation as a source of carbon and
RT   energy.";
RL   Proc. Natl. Acad. Sci. U.S.A. 101:18036-18041(2004).
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC         tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC         COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC         ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC         EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC   -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC       {ECO:0000255|HAMAP-Rule:MF_00255}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC   -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC       {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR   EMBL; AE017340; AAV80849.1; -; Genomic_DNA.
DR   RefSeq; WP_011233269.1; NC_006512.1.
DR   AlphaFoldDB; Q5QY35; -.
DR   SMR; Q5QY35; -.
DR   STRING; 283942.IL0005; -.
DR   EnsemblBacteria; AAV80849; AAV80849; IL0005.
DR   KEGG; ilo:IL0005; -.
DR   eggNOG; COG0751; Bacteria.
DR   HOGENOM; CLU_007220_2_2_6; -.
DR   OMA; LPIPKRM; -.
DR   OrthoDB; 213210at2; -.
DR   Proteomes; UP000001171; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR   GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR   HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR   InterPro; IPR008909; DALR_anticod-bd.
DR   InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR   InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR   PANTHER; PTHR30075; PTHR30075; 1.
DR   Pfam; PF05746; DALR_1; 1.
DR   Pfam; PF02092; tRNA_synt_2f; 1.
DR   PRINTS; PR01045; TRNASYNTHGB.
DR   TIGRFAMs; TIGR00211; glyS; 1.
DR   PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE   3: Inferred from homology;
KW   Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW   Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT   CHAIN           1..688
FT                   /note="Glycine--tRNA ligase beta subunit"
FT                   /id="PRO_1000006369"
SQ   SEQUENCE   688 AA;  76146 MW;  09AE8031B5117B57 CRC64;
     MQKENLLIEL GTEELPPKAL KSLRDSLKSG IESGLKNAEL SFDSIEAYAT PRRLAVLVKQ
     VETEQQDKEV EKRGPAINVA FDDTGKPTKA AEGWARSNGI TVEQADRLKT DKGEWLLHKA
     TVKGQALSVL VQGILEAAIK ALPIPKPMRW GDSTAQFIRP VHTLTVMLGS ELIDAEILET
     KSARFIQGHR FHSPQGFELD HVDNYLFKLR EAKVIANFEE RIETIQSEVS RLASELGGQV
     IQDDELVEEV AALVEWPVAL TASFDQGFLA VPKEPLIVTM KDDQRYFPVE DGKGNLLPQF
     IFITNIESRD PQQIIKGNEK VVRPRLADAQ FFFESDKKVT LESRVAALDS VLFQKQLGSI
     GDKARRISVL AGKIANQLTA DVKASERAGL LCKADLVSDM VSEFPETQGV MGKHYALNDG
     ESPVVAEAIE QHYWPRFSGD ELPLTKEACA VALADKLDTL VGIFGIGQVP KGDRDPFALR
     RAALGLLRTL VERKLSLDLH ELLAASVEGF GDKLSNNTVA TDVFDFLLGR FRPWYQDQGI
     TVDVIQSVLA RSPSKPTDFD QRVKAVQSFK SMDSAASLAA ANKRVGNILA KSDEEISGNV
     DEALLQEESE TTLYRLVKQT EGAVKPLIAA GKYSDALTHL SELKEPVDAF FEHVMVNADD
     DKVRINRLNL LFRLRQLFLE IADISLLQ