SYGB_MYXXD
ID SYGB_MYXXD Reviewed; 703 AA.
AC Q1D7R9;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 11-JUL-2006, sequence version 1.
DT 03-AUG-2022, entry version 105.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=MXAN_3101;
OS Myxococcus xanthus (strain DK1622).
OC Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales;
OC Cystobacterineae; Myxococcaceae; Myxococcus.
OX NCBI_TaxID=246197;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DK1622;
RX PubMed=17015832; DOI=10.1073/pnas.0607335103;
RA Goldman B.S., Nierman W.C., Kaiser D., Slater S.C., Durkin A.S., Eisen J.,
RA Ronning C.M., Barbazuk W.B., Blanchard M., Field C., Halling C., Hinkle G.,
RA Iartchuk O., Kim H.S., Mackenzie C., Madupu R., Miller N., Shvartsbeyn A.,
RA Sullivan S.A., Vaudin M., Wiegand R., Kaplan H.B.;
RT "Evolution of sensory complexity recorded in a myxobacterial genome.";
RL Proc. Natl. Acad. Sci. U.S.A. 103:15200-15205(2006).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR EMBL; CP000113; ABF91890.1; -; Genomic_DNA.
DR RefSeq; WP_011553151.1; NC_008095.1.
DR AlphaFoldDB; Q1D7R9; -.
DR SMR; Q1D7R9; -.
DR STRING; 246197.MXAN_3101; -.
DR EnsemblBacteria; ABF91890; ABF91890; MXAN_3101.
DR GeneID; 41360462; -.
DR KEGG; mxa:MXAN_3101; -.
DR eggNOG; COG0751; Bacteria.
DR HOGENOM; CLU_007220_2_2_7; -.
DR OMA; LPIPKRM; -.
DR OrthoDB; 213210at2; -.
DR Proteomes; UP000002402; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..703
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_1000101304"
SQ SEQUENCE 703 AA; 76788 MW; 53004A3AC563432E CRC64;
MARDLLLEVG AEEIPASFIG PALDDLKRVI TERMADARLK HGEVRTFGTP RRLAVWVKDV
ADAGEDIIKE VLGPSAKAAF DAQGKPTKAA EKFAESLKLA VDQLGRATTA KGEYLSARVE
EKGRPAADIL KDTLHAAVHG INFRKSMRWG DVDTSFARPV QWLVALLGSD VLPVVFGDVT
SGRTTRGHRF LSPDAIELKA PAEYEVALEK AHVVADITKR RAQLVEKVRA AASKAGAQLL
EDESLVDQVT NLVELPSPVV GTFEERHLDL PPEVLVQEMK SHQRYFSLVD SAGKLQPKFI
AVSNTPVRDE QLSLRGYQRV LRARLADGRF FFDEDRKTPL IDRVEKLGRV VWQGQLGSYL
EKVERFRTLA VWLGQEAGRA GEAATIERAA TLAKADLVTG MVGEFPELQG IMGREYARAG
GEPDAVALAI AEHYLPRGAE DALPTQDPGA LIGIADRLDS LCGIFAIGKA PTGAADPFAL
RRACIAIIRL VLGRGYRFSL SAAVDESLRL LAPKIANAKR KAGEPAPREQ VLEFFRGRLK
ALWGEQHRTD VVEAVLSAGF DDLVAAQKRL EALSHIVGRA DFQPLAVAFK RVVNIVEKQG
RDVQGGETNP QKLVDEPERN LHTAFTQARS TVSGLVRVDD FSGALREITG LKPAVDTFFD
KVMVMAEDKA LRENRIRLLV EIGALFNQVA DFSKIQAETA AAA