SYGB_PHOLL
ID SYGB_PHOLL Reviewed; 689 AA.
AC Q7MB99;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 15-DEC-2003, sequence version 1.
DT 03-AUG-2022, entry version 121.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=plu0294;
OS Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 /
OS TT01).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Morganellaceae; Photorhabdus.
OX NCBI_TaxID=243265;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 15139 / CIP 105565 / TT01;
RX PubMed=14528314; DOI=10.1038/nbt886;
RA Duchaud E., Rusniok C., Frangeul L., Buchrieser C., Givaudan A.,
RA Taourit S., Bocs S., Boursaux-Eude C., Chandler M., Charles J.-F.,
RA Dassa E., Derose R., Derzelle S., Freyssinet G., Gaudriault S., Medigue C.,
RA Lanois A., Powell K., Siguier P., Vincent R., Wingate V., Zouine M.,
RA Glaser P., Boemare N., Danchin A., Kunst F.;
RT "The genome sequence of the entomopathogenic bacterium Photorhabdus
RT luminescens.";
RL Nat. Biotechnol. 21:1307-1313(2003).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR EMBL; BX571859; CAE12589.1; -; Genomic_DNA.
DR RefSeq; WP_011144692.1; NC_005126.1.
DR AlphaFoldDB; Q7MB99; -.
DR SMR; Q7MB99; -.
DR STRING; 243265.plu0294; -.
DR EnsemblBacteria; CAE12589; CAE12589; plu0294.
DR GeneID; 24168358; -.
DR KEGG; plu:plu0294; -.
DR eggNOG; COG0751; Bacteria.
DR HOGENOM; CLU_007220_2_2_6; -.
DR OMA; LPIPKRM; -.
DR OrthoDB; 213210at2; -.
DR BioCyc; PLUM243265:PLU_RS01430-MON; -.
DR Proteomes; UP000002514; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..689
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_1000006383"
SQ SEQUENCE 689 AA; 76851 MW; 3510C8445F0EE188 CRC64;
MTQQTFLVEI GTEELPPKAL RSLAEAFAAN FAAELDNANL AYGEISWFAT PRRLALKVAN
LDEAQADREV EKRGPAIAQA FDTEGKPTKA AEGWARGCGI TAAQAERLVT DKGEWLLYRA
LVKGRSVKEL LAAMVNSALN KLPIPKLMRW SDKETQFARP VHTVTMLFGD ELIEGEILGI
KSARVIRGHR FMGESEFAID NAEQYPEILQ QRGRVLADYT TRKVLIKQDV EQAAIKLGGV
ADISDSLLEE VTSLVEWPVV LTAKFEEKFL EVPAEALVYT MKGDQKYFPV YDNAGKLMAN
FIFVANIDSS DPQQIIDGNE KVVRPRLADA EFFFKTDRKQ RLEDNLPRLE TVLFQKQLGT
LRDKTDRIQA LAGWIAEKIG ADVNHATRAG LLSKCDLMTN MVFEFTDTQG VMGMHYARHD
GEAEDVALAL NEQYQPRFAG DELPSTGVSC ALAIADKMDT LAGIFGIGQH PRGDKDPFAL
RRAALGALRI IVEKKLPLDL QTLTEEAVRL YGDKLTNAKV TDDVVEFMLG RFRAWYQEQG
YRVDTIQAVL ARRPTQPADF DARVKAVTHF RTLDEAAALA AANKRVSNIL AKSEETLNEK
VDVSTLKAPE EVKLATHLIV LQDKLAPLFA EGHYQEALVE LASLREVVDA FFDNVMVMDE
DLQVRVNRLT LLSELRDLFL RVADISLLQ