SYGB_RHILO
ID SYGB_RHILO Reviewed; 718 AA.
AC Q986B5;
DT 08-NOV-2002, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2001, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=mlr7435;
OS Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099)
OS (Mesorhizobium loti (strain MAFF 303099)).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Phyllobacteriaceae; Mesorhizobium.
OX NCBI_TaxID=266835;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=LMG 29417 / CECT 9101 / MAFF 303099;
RX PubMed=11214968; DOI=10.1093/dnares/7.6.331;
RA Kaneko T., Nakamura Y., Sato S., Asamizu E., Kato T., Sasamoto S.,
RA Watanabe A., Idesawa K., Ishikawa A., Kawashima K., Kimura T., Kishida Y.,
RA Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Mochizuki Y.,
RA Nakayama S., Nakazaki N., Shimpo S., Sugimoto M., Takeuchi C., Yamada M.,
RA Tabata S.;
RT "Complete genome structure of the nitrogen-fixing symbiotic bacterium
RT Mesorhizobium loti.";
RL DNA Res. 7:331-338(2000).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR EMBL; BA000012; BAB53538.1; -; Genomic_DNA.
DR RefSeq; WP_010914845.1; NC_002678.2.
DR AlphaFoldDB; Q986B5; -.
DR SMR; Q986B5; -.
DR STRING; 266835.14026942; -.
DR PRIDE; Q986B5; -.
DR EnsemblBacteria; BAB53538; BAB53538; BAB53538.
DR KEGG; mlo:mlr7435; -.
DR PATRIC; fig|266835.9.peg.5937; -.
DR eggNOG; COG0751; Bacteria.
DR HOGENOM; CLU_007220_2_1_5; -.
DR OMA; LPIPKRM; -.
DR OrthoDB; 213210at2; -.
DR Proteomes; UP000000552; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 2.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..718
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_0000072922"
SQ SEQUENCE 718 AA; 78611 MW; 6664029CFFA0C689 CRC64;
MPDLLLELRS EEIPARMQRK AAGDLKKMLT DGLVEAGLTY EAAREYWTPR RLTLDIRGLT
ARSKDIREEI KGPSTTAPEQ AVQGFLRKAG LSSVADAHVH SDPKKGDFYV AHISKPGRAA
EEIIAQLVPG IIRNFPWPKS MRWGPASAKP GSLRWVRPLQ SVLCTFGPET EEPVVVDFEI
DGIRSGNITY GHRFLAPGEI TVRRFDDYVS KLEAAKVVLD ADRRKEIILA DARNLAFANG
LDLVEDEGLL EEVSGLVEWP VVLMGEFEEA FLAIPAEVIR LTIRANQKCF VTRPQGEGEA
LSNRFILTSN IEARDGGKEI AHGNGKVVRA RLSDALYFWT TDQGDLPDLG QLEASAEKFG
LDLNKPLDQR MARLDHLNVT FHAKLGTQGE RVERIRRLAE ELAPTVGADP VLAARAAVLA
KADLQTEVVG EFPELQGAMG RKYALLQGEH PSVAAAIEEH YKPQGPSDYV PSDPVSVAVA
LADKLDTLVG FWAIDEKPTG SKDPYALRRA ALGVVRILVE DRIQLRLSSI FASAGACYAG
SGADQTRDLL AFFHDRLKVY LRDQGARHDL IDAVITPQSD DLLQIVRRVE ALGSFLDTED
GKNLLAGTKR AANILAAEEK KKTAVAKTVE PALFKENAEK SLFAAVNQAE KQAGEAIQNE
DFSAAMLALS ALREPVDSFF EGVLVNDEDL EVRANRLALL TRIRAATGQV ADFSKIAG