SYGB_RUEST
ID SYGB_RUEST Reviewed; 687 AA.
AC Q1GE74;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 27-JUN-2006, sequence version 1.
DT 25-MAY-2022, entry version 109.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=TM1040_2310;
OS Ruegeria sp. (strain TM1040) (Silicibacter sp.).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Ruegeria; unclassified Ruegeria.
OX NCBI_TaxID=292414;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TM1040;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Detter J.C.,
RA Glavina del Rio T., Hammon N., Israni S., Dalin E., Tice H., Pitluck S.,
RA Brettin T., Bruce D., Han C., Tapia R., Goodwin L., Thompson L.S.,
RA Gilna P., Schmutz J., Larimer F., Land M., Hauser L., Kyrpides N., Kim E.,
RA Belas R., Moran M.A., Buchan A., Gonzalez J.M., Schell M.A., Sun F.,
RA Richardson P.;
RT "Complete sequence of chromosome of Silicibacter sp. TM1040.";
RL Submitted (MAY-2006) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR EMBL; CP000377; ABF65042.1; -; Genomic_DNA.
DR RefSeq; WP_011539630.1; NC_008044.1.
DR AlphaFoldDB; Q1GE74; -.
DR SMR; Q1GE74; -.
DR STRING; 292414.TM1040_2310; -.
DR EnsemblBacteria; ABF65042; ABF65042; TM1040_2310.
DR KEGG; sit:TM1040_2310; -.
DR eggNOG; COG0751; Bacteria.
DR HOGENOM; CLU_007220_2_1_5; -.
DR OMA; LPIPKRM; -.
DR OrthoDB; 213210at2; -.
DR Proteomes; UP000000636; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR SMART; SM00836; DALR_1; 1.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..687
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_1000101341"
SQ SEQUENCE 687 AA; 74815 MW; 7201F24086EA4B75 CRC64;
MADLLIELFS EEIPARMQAR AGEDLKKRMT DGLVEAGLTY AGAHALTTPR RLTLAIEGLL
DHSPTVREER KGPKVGAPEK AIEGFLRGAG LTRDQLEERD TPKGAVYFAT IEKPGRPAAE
IIAEVLEDTI RNFPWPKSMR WGAGALRWVR PLHSILCLLT REEGSEVVPL EIDGVTSGDS
TAGHRFMAPA RFAVTGFEDY AAKLKRAFVV LDPKEREAAI WQDATNQAFA SGLEVVDDKG
LLAEVAGLVE WPVVLMGSID AEFLDLPPEV LQTSMKEHQK FFSVKNPKTG RIEKFITVAN
RETADNGATI LAGNQKVLSA RLADAKFFWE NDLRIAKSEV GVEGWLESLG NVTFHNKLGT
QAARIDRIAA LAREIAPVVG ADADLAEQAA KVAKADLSSE MVYEFPELQG LMGRYYAQAA
GLPQEVANAC ELHYSPLGPS DDVPTEPVSV AVALADKIDT LTGFWAIDEK PTGSKDPYAL
RRAALGVIRL VLSNDVRVGL KEVFAKAYEG ADGSDLLSFF HDRLKVFLRD QGIRHDVIDA
CIAMEGSDDL TLLVKRARAL EDFMKSEDGE NLLQGFKRAN NILSQAEEKD GVEYSFGADK
KFVEDPAEAA LFEALAANEA AISTAIEAED FAAAMGGMAA LRAPVDAFFE AVQVNSDNPV
VRRNRLNLLS QIRKVCGQVA DLSRIEG