SYGB_SINMW
ID SYGB_SINMW Reviewed; 721 AA.
AC A6U6P3;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 21-AUG-2007, sequence version 1.
DT 25-MAY-2022, entry version 79.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=Smed_0466;
OS Sinorhizobium medicae (strain WSM419) (Ensifer medicae).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium.
OX NCBI_TaxID=366394;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=WSM419;
RG US DOE Joint Genome Institute;
RA Copeland A., Lucas S., Lapidus A., Barry K., Glavina del Rio T., Dalin E.,
RA Tice H., Pitluck S., Chain P., Malfatti S., Shin M., Vergez L., Schmutz J.,
RA Larimer F., Land M., Hauser L., Kyrpides N., Mikhailova N., Reeve W.G.,
RA Richardson P.;
RT "Complete sequence of Sinorhizobium medicae WSM419 chromosome.";
RL Submitted (JUN-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR EMBL; CP000738; ABR59323.1; -; Genomic_DNA.
DR RefSeq; WP_011974669.1; NC_009636.1.
DR RefSeq; YP_001326158.1; NC_009636.1.
DR AlphaFoldDB; A6U6P3; -.
DR SMR; A6U6P3; -.
DR STRING; 366394.Smed_0466; -.
DR EnsemblBacteria; ABR59323; ABR59323; Smed_0466.
DR GeneID; 61609740; -.
DR KEGG; smd:Smed_0466; -.
DR PATRIC; fig|366394.8.peg.3551; -.
DR eggNOG; COG0751; Bacteria.
DR HOGENOM; CLU_007220_2_1_5; -.
DR OMA; LPIPKRM; -.
DR OrthoDB; 213210at2; -.
DR Proteomes; UP000001108; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 2.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..721
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_1000101342"
SQ SEQUENCE 721 AA; 78696 MW; 0C15F338144AAAB3 CRC64;
MPDLLIELRS EEIPARMQRK AAGDLKKLVT DALVEAGLTY EGAREYWTPR RLTLDIRGLN
ARSADMREER KGPRIDANDK AIEGFLRAAG LSSISEAHVH NDPKKGDFYV AHIVRRGREA
EEIVADVMPA IIRDFPWPKS MRSGAASAIP GSLRWVRPLQ SIVCTFGAEH DETKVIPFEV
DGIVASNITY GHRFHAPEAI AVRRFADYAE KLGKAKVVID AERRKEIISA DAHNIAFANG
LELVEDEGLL EEVAGLVEWP KVLMGSFEES YLAIPSEIIR LTIKTNQKCF VTRKPGAETL
SNRFILVSNI EAKDGGKEIV HGNGKVVRAR LSDAAHFWKR DQGDLPDLET LAASAGKFGL
DLKKPLDQRM AKLDALNVTF HAKLGTQGER VARIRSLAAA LAKITGADPA SVARAAVLAK
ADLRTEAVGE FPELQGIMGH KYAVLQGESA AVANAIEDHY KPQGPSDHVP TDPVSVSVAL
ADKLDTLVGF WAIDERPTGS KDPYALRRAA LGVIRLILEG RARLPLLPCF DVALASLKLQ
RPAMAADVSG DLLAFFHDRL KVYLRDLGAR HDLIDAVLAP DADDLLMIAR RVEALTAFIT
AEEGRNLLAG TKRATQILAA EEKKGTEVAA SVDEELFRLD AERLLYASIK VASDGARAAI
AKEDFRSAME ALSKLREPVD AFFNDVLVND EDKAIRANRL ALLGLIRSAT GEVADFSKIS
G