SYGB_SOLM1
ID SYGB_SOLM1 Reviewed; 697 AA.
AC C4XS54;
DT 22-SEP-2009, integrated into UniProtKB/Swiss-Prot.
DT 28-JUL-2009, sequence version 1.
DT 03-AUG-2022, entry version 75.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=DMR_20850;
OS Solidesulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1)
OS (Desulfovibrio magneticus).
OC Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales;
OC Desulfovibrionaceae; Solidesulfovibrio.
OX NCBI_TaxID=573370;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700980 / DSM 13731 / RS-1;
RX PubMed=19675025; DOI=10.1101/gr.088906.108;
RA Nakazawa H., Arakaki A., Narita-Yamada S., Yashiro I., Jinno K., Aoki N.,
RA Tsuruyama A., Okamura Y., Tanikawa S., Fujita N., Takeyama H.,
RA Matsunaga T.;
RT "Whole genome sequence of Desulfovibrio magneticus strain RS-1 revealed
RT common gene clusters in magnetotactic bacteria.";
RL Genome Res. 19:1801-1808(2009).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR EMBL; AP010904; BAH75576.1; -; Genomic_DNA.
DR RefSeq; WP_015860762.1; NC_012796.1.
DR AlphaFoldDB; C4XS54; -.
DR SMR; C4XS54; -.
DR STRING; 573370.DMR_20850; -.
DR EnsemblBacteria; BAH75576; BAH75576; DMR_20850.
DR KEGG; dma:DMR_20850; -.
DR eggNOG; COG0751; Bacteria.
DR HOGENOM; CLU_007220_2_2_7; -.
DR OMA; LPIPKRM; -.
DR Proteomes; UP000009071; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..697
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_1000204602"
SQ SEQUENCE 697 AA; 75148 MW; 25F7CCE2127A2494 CRC64;
MSHFLFEIGF EEMPARFLPG LVDEVKKLFA EGLTQAKVDC GTIAAFATPR RLVVSVPDLA
AAARREEEVV SGPPEKVGFD AAGAPTKAAE GFAKGQGLDV SAVFVMDTPK GRYLALRKTT
GGEAAIELLP ALCLEAVKKL SFPKRMRWGS REFAFGRPVH WFLALLDDAV VPFQFDDITS
GRATYGQRIM GPGPFEVPTA AAYFDIIRDK GKVVLDARER EGIVRSQAEA LAKEAGGTAV
INPALLAEVT GLTEHPVVLL GRFDPKFLDV PREVLITSME SHQKSFAVED GKGGLLPVFL
TTLGLVPGNV ELVRRGWQRV LTARLEDARF FWEADLSASL ETWQKKLENV VFLAGLGSMR
DKGKRLERLC GLIAEQAGKP EIMLEASQAG GLAKVDLVSD MVGEFAELQG IMGGIYSRRK
GQSKTASRAV AEQYLPAGPD SPVPATLAGA ILSIADKADT LAGCFGLDMA PTGAADPYAL
RRAALGICRV VIEHGLRLDL MELLQGAIDG YGEVKFKVDR THVLAKLLDF FGQRLKAYFT
GQGYDTLVVE AALGASYTDI AALSARLSAL AGFAAKPDFD QAVLTFKRAA NIIRKQGVGA
GVPLTGAVKA ALLEEQAEKD LAAVCQDVFP RFDALFDAGD YGAVLELLYE LRPSVDAFFD
NVMVMCDDMD MRLNRLNLLK SLVDRLGRVA DFAALQV