SYGB_THEYD
ID SYGB_THEYD Reviewed; 679 AA.
AC B5YJ12;
DT 24-MAR-2009, integrated into UniProtKB/Swiss-Prot.
DT 25-NOV-2008, sequence version 1.
DT 25-MAY-2022, entry version 75.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=THEYE_A2099;
OS Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87).
OC Bacteria; Nitrospirae; Thermodesulfovibrionia; Thermodesulfovibrionales;
OC Thermodesulfovibrionaceae; Thermodesulfovibrio.
OX NCBI_TaxID=289376;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 51303 / DSM 11347 / YP87;
RA Dodson R.J., Durkin A.S., Wu M., Eisen J., Sutton G.;
RT "The complete genome sequence of Thermodesulfovibrio yellowstonii strain
RT ATCC 51303 / DSM 11347 / YP87.";
RL Submitted (AUG-2008) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; CP001147; ACI20176.1; -; Genomic_DNA.
DR RefSeq; WP_012544914.1; NC_011296.1.
DR RefSeq; YP_002249886.1; NC_011296.1.
DR AlphaFoldDB; B5YJ12; -.
DR SMR; B5YJ12; -.
DR STRING; 289376.THEYE_A2099; -.
DR EnsemblBacteria; ACI20176; ACI20176; THEYE_A2099.
DR KEGG; tye:THEYE_A2099; -.
DR PATRIC; fig|289376.4.peg.2047; -.
DR eggNOG; COG0751; Bacteria.
DR HOGENOM; CLU_007220_2_2_0; -.
DR InParanoid; B5YJ12; -.
DR OMA; LPIPKRM; -.
DR OrthoDB; 213210at2; -.
DR Proteomes; UP000000718; Chromosome.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR PANTHER; PTHR30075; PTHR30075; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR SMART; SM00836; DALR_1; 1.
DR SUPFAM; SSF47323; SSF47323; 1.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..679
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_1000101366"
SQ SEQUENCE 679 AA; 78736 MW; BC7BB017C43AFE0D CRC64;
MGKILFEIGA EEIPARFIPL AISQIEENFK KITSEYRIEL ESIKVYATPR RLTLLAELSS
EQASEEKLVW GPPVHVAFDE KGLPKESAYA FAKAQGIEVD QLQIKPKGKG NYVCAVLSKK
GKKTEEVLPE ILRNLFYSLN FPKMMRWGEG TLRFIRPVRW FLALYDDRFI SFEIEGIKTE
NKTQGHRFLS ENPLNIDRVD NYEFILEKAF VIVDPEKRKK IILTQAEELA KKVNGKILWN
NELIEEVTYL VEFPNSVLCS FSMQYLKLPE ELLITVMKDH QRYFAIIDNE GKLKNYFVVV
SNTKAENEEN IKKGAERVIK ARFEDARFYY EEDLKKGLVN LLEATKGIIY HKKLGSLYDK
SLRIIRIAER LSDRLIPEKT ELVKIAANYC KADLASGVVG EFPELQGIMG GYYAKNAGMP
EEVFLAIREH YLPKGFTDEI PSNDIGCIIS LADKLDHIAT FFYLGEIPSG TEDPFGLRRA
ANGIISILLK KKYSLSLLET VSMIQEFVDE KLKEQISIFI VQRFESYLES TGYDVNLIKT
ISDFILIRPV YEIKKRLEAV SLFRSKEDFE EFFLAVKRVS NIIKNYEKFE LNPELFSSEE
EKKLFNEIEK YKENLYEYLN SQQFFEALNY LHKLTPTINN FFDNVLVMDK DEKIKRNRLA
LLQHLSELLK SVADISRLY