SYGB_VIBCH
ID SYGB_VIBCH Reviewed; 688 AA.
AC Q9KVW8;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=Glycine--tRNA ligase beta subunit;
DE EC=6.1.1.14;
DE AltName: Full=Glycyl-tRNA synthetase beta subunit;
DE Short=GlyRS;
GN Name=glyS; OrderedLocusNames=VC_0020;
OS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=243277;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 39315 / El Tor Inaba N16961;
RX PubMed=10952301; DOI=10.1038/35020000;
RA Heidelberg J.F., Eisen J.A., Nelson W.C., Clayton R.A., Gwinn M.L.,
RA Dodson R.J., Haft D.H., Hickey E.K., Peterson J.D., Umayam L.A., Gill S.R.,
RA Nelson K.E., Read T.D., Tettelin H., Richardson D.L., Ermolaeva M.D.,
RA Vamathevan J.J., Bass S., Qin H., Dragoi I., Sellers P., McDonald L.A.,
RA Utterback T.R., Fleischmann R.D., Nierman W.C., White O., Salzberg S.L.,
RA Smith H.O., Colwell R.R., Mekalanos J.J., Venter J.C., Fraser C.M.;
RT "DNA sequence of both chromosomes of the cholera pathogen Vibrio
RT cholerae.";
RL Nature 406:477-483(2000).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14;
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000305}.
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DR EMBL; AE003852; AAF93198.1; -; Genomic_DNA.
DR PIR; F82373; F82373.
DR RefSeq; NP_229679.1; NC_002505.1.
DR RefSeq; WP_001040221.1; NZ_LT906614.1.
DR AlphaFoldDB; Q9KVW8; -.
DR SMR; Q9KVW8; -.
DR STRING; 243277.VC_0020; -.
DR DNASU; 2614960; -.
DR EnsemblBacteria; AAF93198; AAF93198; VC_0020.
DR GeneID; 57741478; -.
DR KEGG; vch:VC_0020; -.
DR PATRIC; fig|243277.26.peg.19; -.
DR eggNOG; COG0751; Bacteria.
DR HOGENOM; CLU_007220_2_2_6; -.
DR OMA; LPIPKRM; -.
DR BioCyc; VCHO:VC0020-MON; -.
DR Proteomes; UP000000584; Chromosome 1.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..688
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_0000072935"
SQ SEQUENCE 688 AA; 75925 MW; 9B6A9A21715D2B39 CRC64;
MAKEFLIELG TEELPPKQLR TLAEAFAANF AAELATADIA HEGVTWFATP RRLALKVANL
AESQPDRVVE KRGPAVNVAF DADGKPTKAA EGWARGNGIT VEQAERLVTD KGEWLLFKEQ
VQGQQTASVV VEMAAKALAN LPIAKPMRWG DKETQFIRPV KTLTILFGSE LIQGEILGVA
SARTLRGHRF MGEAEFTIES AEQYPAILEE RGKVIADYAT RKAMIIEGSQ QAAQQLGGIA
DLEDALVEEV TSLVEWPVVM TAKFEEKFLK VPAEALVYTM KGDQKYFPVY DASKKLLPNF
IFVSNIESKE PRHIVEGNEK VVRPRLADAE FFFNTDRKRP LVDRLPLLEN AIFQQQLGTI
KDKTDRITEL AGYIAEQIGA DVEKSKRAGL LAKCDLMTSM VFEFTDTQGV MGMHYARHDG
EAEEVAVALN EQYMPRFAGD ELPSRGVSAA VAMADKLDTI VGIFGIGQAP KGSDPFALRR
ASLGVLRILV EYGYQLDLVD LIAKAKSLFG DRLTNANVEQ EVIEFMLGRF PTWYQDAGFS
IDIIQAVLAR NPTKPADFDQ RVKAVSHFRA LEEAEALAAA NKRVGNILAK YDGELGEEID
LALLQEDAEK ALAEAVEIMA EALEPAFATG NYQEALSKLA GLRAPVDAFF DNVMVMADDE
ALKKNRLTLL NKLRNLFLQI ADISLLQK