SYGB_VIBVU
ID SYGB_VIBVU Reviewed; 693 AA.
AC Q8DDJ7;
DT 16-JUN-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 25-MAY-2022, entry version 105.
DE RecName: Full=Glycine--tRNA ligase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00255};
DE AltName: Full=Glycyl-tRNA synthetase beta subunit {ECO:0000255|HAMAP-Rule:MF_00255};
DE Short=GlyRS {ECO:0000255|HAMAP-Rule:MF_00255};
GN Name=glyS {ECO:0000255|HAMAP-Rule:MF_00255}; OrderedLocusNames=VV1_0990;
OS Vibrio vulnificus (strain CMCP6).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=216895;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CMCP6;
RA Rhee J.H., Kim S.Y., Chung S.S., Kim J.J., Moon Y.H., Jeong H., Choy H.E.;
RT "Complete genome sequence of Vibrio vulnificus CMCP6.";
RL Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + glycine + tRNA(Gly) = AMP + diphosphate + glycyl-
CC tRNA(Gly); Xref=Rhea:RHEA:16013, Rhea:RHEA-COMP:9664, Rhea:RHEA-
CC COMP:9683, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57305,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78522, ChEBI:CHEBI:456215;
CC EC=6.1.1.14; Evidence={ECO:0000255|HAMAP-Rule:MF_00255};
CC -!- SUBUNIT: Tetramer of two alpha and two beta subunits.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00255}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00255}.
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DR EMBL; AE016795; AAO09480.1; -; Genomic_DNA.
DR RefSeq; WP_011079027.1; NC_004459.3.
DR AlphaFoldDB; Q8DDJ7; -.
DR SMR; Q8DDJ7; -.
DR EnsemblBacteria; AAO09480; AAO09480; VV1_0990.
DR KEGG; vvu:VV1_0990; -.
DR HOGENOM; CLU_007220_2_2_6; -.
DR OMA; LPIPKRM; -.
DR Proteomes; UP000002275; Chromosome 1.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004820; F:glycine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:InterPro.
DR GO; GO:0006426; P:glycyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR HAMAP; MF_00255; Gly_tRNA_synth_beta; 1.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR015944; Gly-tRNA-synth_bsu.
DR InterPro; IPR006194; Gly-tRNA-synth_heterodimer.
DR PANTHER; PTHR30075; PTHR30075; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF02092; tRNA_synt_2f; 1.
DR PRINTS; PR01045; TRNASYNTHGB.
DR TIGRFAMs; TIGR00211; glyS; 1.
DR PROSITE; PS50861; AA_TRNA_LIGASE_II_GLYAB; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..693
FT /note="Glycine--tRNA ligase beta subunit"
FT /id="PRO_0000072937"
SQ SEQUENCE 693 AA; 76712 MW; 63F6F4C4455DD83F CRC64;
MAKEFLIELG TEELPPTQLR TLAEAFAANF EAELKGAELT HEGVKWYAAP RRLALKVTAL
AEHQADKIVE KRGPAVSAAF DADGNATKAA QGWARGCGIT VDQAERMITD KGEWLLFKQE
VKGQPTADIV VELAAKALAG LPIAKPMRWG NKTTQFIRPV KTLTMLMGSD LIQGEILGVA
SDRVIRGHRF MGEREFTIES AEQYPSILEE RGKVMADYEA RKAIILADAQ KAAAAIGGIA
DLEDDLVEEV TSLVEWPVVL TAKFEEEFLK VPAEALVYTM KGDQKYFPVY TEDKQLLPNF
IFVSNIESKE PRYVIEGNEK VVRPRLADAE FFFNTDRKSK LIDRLPMLEN AIFQQQLGTI
KDKTDRITEL AGYIAEQIGA DVEKSKRAGL LAKCDLMTSM VFEFTDTQGV MGMHYARHDG
EAEEVAVALN EQYMPRFAGD DLPSNGVSSA VAMADKLDTI VGIFGIGQAP KGSDPFALRR
ASLGVLRIIV EYGYNLDLVD LVAKAKSLFA QQDGTSRLTN DNVEQEVIEF MLGRFRAWYQ
DEGFSVDIIQ AVLARRPTKP ADFDQRVKAV SHFRELEAAE ALAAANKRVG NILAKFDGEL
AADIDLALLR EDAEKVLAEN VEVMTEALEP AFATGNYQEA LSKLADLREP VDAFFDNVMV
MADDEALKTN RLTLLNNLRN LFLQIADISL LQK