SYL_RHORT
ID SYL_RHORT Reviewed; 862 AA.
AC Q2RN70;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 24-JAN-2006, sequence version 1.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Leucine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00049};
DE EC=6.1.1.4 {ECO:0000255|HAMAP-Rule:MF_00049};
DE AltName: Full=Leucyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00049};
DE Short=LeuRS {ECO:0000255|HAMAP-Rule:MF_00049};
GN Name=leuS {ECO:0000255|HAMAP-Rule:MF_00049}; OrderedLocusNames=Rru_A3631;
OS Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 /
OS NCIMB 8255 / S1).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales;
OC Rhodospirillaceae; Rhodospirillum.
OX NCBI_TaxID=269796;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1;
RX PubMed=21886856; DOI=10.4056/sigs.1804360;
RA Munk A.C., Copeland A., Lucas S., Lapidus A., Del Rio T.G., Barry K.,
RA Detter J.C., Hammon N., Israni S., Pitluck S., Brettin T., Bruce D.,
RA Han C., Tapia R., Gilna P., Schmutz J., Larimer F., Land M., Kyrpides N.C.,
RA Mavromatis K., Richardson P., Rohde M., Goeker M., Klenk H.P., Zhang Y.,
RA Roberts G.P., Reslewic S., Schwartz D.C.;
RT "Complete genome sequence of Rhodospirillum rubrum type strain (S1).";
RL Stand. Genomic Sci. 4:293-302(2011).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-leucine + tRNA(Leu) = AMP + diphosphate + L-leucyl-
CC tRNA(Leu); Xref=Rhea:RHEA:11688, Rhea:RHEA-COMP:9613, Rhea:RHEA-
CC COMP:9622, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57427,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78494, ChEBI:CHEBI:456215; EC=6.1.1.4;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_00049};
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00049}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00049}.
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DR EMBL; CP000230; ABC24425.1; -; Genomic_DNA.
DR RefSeq; WP_011391378.1; NC_007643.1.
DR RefSeq; YP_428712.1; NC_007643.1.
DR AlphaFoldDB; Q2RN70; -.
DR SMR; Q2RN70; -.
DR STRING; 269796.Rru_A3631; -.
DR EnsemblBacteria; ABC24425; ABC24425; Rru_A3631.
DR KEGG; rru:Rru_A3631; -.
DR PATRIC; fig|269796.9.peg.3752; -.
DR eggNOG; COG0495; Bacteria.
DR HOGENOM; CLU_004427_0_0_5; -.
DR OMA; TFMVLAP; -.
DR OrthoDB; 32262at2; -.
DR PhylomeDB; Q2RN70; -.
DR Proteomes; UP000001929; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004823; F:leucine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006429; P:leucyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR Gene3D; 3.40.50.620; -; 2.
DR Gene3D; 3.90.740.10; -; 1.
DR HAMAP; MF_00049_B; Leu_tRNA_synth_B; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR002302; Leu-tRNA-ligase.
DR InterPro; IPR025709; Leu_tRNA-synth_edit.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR PANTHER; PTHR43740; PTHR43740; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 3.
DR Pfam; PF13603; tRNA-synt_1_2; 1.
DR PRINTS; PR00985; TRNASYNTHLEU.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
DR TIGRFAMs; TIGR00396; leuS_bact; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..862
FT /note="Leucine--tRNA ligase"
FT /id="PRO_0000334805"
FT MOTIF 44..54
FT /note="'HIGH' region"
FT MOTIF 622..626
FT /note="'KMSKS' region"
FT BINDING 625
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_00049"
SQ SEQUENCE 862 AA; 95530 MW; 9D92FEB9305F579A CRC64;
MASEDRYNVK ETEAKWQTAW AEGGCFTARE DRTRPKYYVL EMFPYPSGRI HMGHVRNYTL
GDVVARFKRA QGFNVLHPMG WDAFGLPAEN AAIQRGVHPA TWTRQNIAIM REQFKPMGLS
IDWSREVSTC EPAYYRHEQK MFLDFLKAGL AYRRESWVNW DPVEHTVLAN EQVIDGKGWR
SGAPVERRKL SQWFLRITRY AEDLLAAIGD LDRWPDKVRL MQTNWIGRSE GARVRFGLVG
RDQALEVYTT RPDTLFGASF CAISANHPLA AEIAATNPDL AAFIAECGRM GTSEVEIETA
EKKGFDTGLK VRHPFDPAWE LPVYVANFVL MEYGTGAIFG CPAHDQRDMD FARKYGLPVR
AVVAPAGVDA EAFAKDLEAS DTAFSEDGVA IASGFLDGLP VSEAKARAIA HIAELGAGEG
VVQFRLRDWG VSRQRYWGCP IPIIHCDDCG PVPVPEDQLP VLLPEDVTFD KPGNPLDHHP
TWKHVACPQC GKPARRETDT FDTFFESSWY FARFCAPHDT DRAFEREAVD YWLPVDQYVG
GVEHAVLHLL YSRFFTRALR DCGYLGVSEP FTGLFTQGMI CHETYRDTDG AWLSPDQIDK
AADGTATLLS DGSPVSVGRS EKMSKSKMNT VDPTAILESY GADAARLFML SDSPPDRDMD
WTDSGIEGAW RYIGRLWRMA LQPQIDPGAV GAPLPADLGP GAAALVRHVH KAVAGVTDDL
EKFRFNAAVA RLRELTNAIA ALDGKEAGAG AVYRFALETA ARLAAPMIPH IAEEMWSHLG
RDGLLAETPW PTWDPLMLID DQVTIAVQVN GKMRGTVDLP KDAKREDAEA AALALPTVLA
QLAGAAPRKV IVVPNRIINV VV