SYM_BUCAP
ID SYM_BUCAP Reviewed; 545 AA.
AC Q9ZHD7;
DT 01-DEC-2000, integrated into UniProtKB/Swiss-Prot.
DT 30-AUG-2002, sequence version 2.
DT 03-AUG-2022, entry version 137.
DE RecName: Full=Methionine--tRNA ligase;
DE EC=6.1.1.10;
DE AltName: Full=Methionyl-tRNA synthetase;
DE Short=MetRS;
GN Name=metG; OrderedLocusNames=BUsg_102;
OS Buchnera aphidicola subsp. Schizaphis graminum (strain Sg).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Erwiniaceae; Buchnera.
OX NCBI_TaxID=198804;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Sg;
RX PubMed=12089438; DOI=10.1126/science.1071278;
RA Tamas I., Klasson L., Canbaeck B., Naeslund A.K., Eriksson A.-S.,
RA Wernegreen J.J., Sandstroem J.P., Moran N.A., Andersson S.G.E.;
RT "50 million years of genomic stasis in endosymbiotic bacteria.";
RL Science 296:2376-2379(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-234.
RX PubMed=9767718; DOI=10.1007/s002849900392;
RA Clark M.A., Baumann L., Baumann P.;
RT "Buchnera aphidicola (Aphid endosymbiont) contains genes encoding enzymes
RT of histidine biosynthesis.";
RL Curr. Microbiol. 37:356-358(1998).
CC -!- FUNCTION: Is required not only for elongation of protein synthesis but
CC also for the initiation of all mRNA translation through initiator
CC tRNA(fMet) aminoacylation. {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-methionine + tRNA(Met) = AMP + diphosphate + L-
CC methionyl-tRNA(Met); Xref=Rhea:RHEA:13481, Rhea:RHEA-COMP:9667,
CC Rhea:RHEA-COMP:9698, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019,
CC ChEBI:CHEBI:57844, ChEBI:CHEBI:78442, ChEBI:CHEBI:78530,
CC ChEBI:CHEBI:456215; EC=6.1.1.10;
CC -!- COFACTOR:
CC Name=Zn(2+); Xref=ChEBI:CHEBI:29105; Evidence={ECO:0000250};
CC Note=Binds 1 zinc ion per subunit. {ECO:0000250};
CC -!- SUBUNIT: Monomer. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC MetG type 1 subfamily. {ECO:0000305}.
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DR EMBL; AE013218; AAM67672.1; -; Genomic_DNA.
DR EMBL; AF067228; AAC97364.1; -; Genomic_DNA.
DR RefSeq; WP_011053638.1; NC_004061.1.
DR AlphaFoldDB; Q9ZHD7; -.
DR SMR; Q9ZHD7; -.
DR STRING; 198804.BUsg_102; -.
DR PRIDE; Q9ZHD7; -.
DR EnsemblBacteria; AAM67672; AAM67672; BUsg_102.
DR KEGG; bas:BUsg_102; -.
DR eggNOG; COG0143; Bacteria.
DR HOGENOM; CLU_009710_7_0_6; -.
DR OMA; SDMHGTP; -.
DR OrthoDB; 761140at2; -.
DR Proteomes; UP000000416; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0004825; F:methionine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006431; P:methionyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd07957; Anticodon_Ia_Met; 1.
DR Gene3D; 2.20.28.20; -; 1.
DR Gene3D; 3.40.50.620; -; 1.
DR HAMAP; MF_00098; Met_tRNA_synth_type1; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR041872; Anticodon_Met.
DR InterPro; IPR023458; Met-tRNA_ligase_1.
DR InterPro; IPR014758; Met-tRNA_synth.
DR InterPro; IPR015413; Methionyl/Leucyl_tRNA_Synth.
DR InterPro; IPR033911; MetRS_core.
DR InterPro; IPR029038; MetRS_Zn.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR PANTHER; PTHR45765; PTHR45765; 1.
DR Pfam; PF19303; Anticodon_3; 1.
DR Pfam; PF09334; tRNA-synt_1g; 1.
DR PRINTS; PR01041; TRNASYNTHMET.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF57770; SSF57770; 1.
DR TIGRFAMs; TIGR00398; metG; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase; Metal-binding;
KW Nucleotide-binding; Protein biosynthesis; Zinc.
FT CHAIN 1..545
FT /note="Methionine--tRNA ligase"
FT /id="PRO_0000139112"
FT MOTIF 15..25
FT /note="'HIGH' region"
FT MOTIF 332..336
FT /note="'KMSKS' region"
FT BINDING 146
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 149
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 159
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 162
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 335
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250"
SQ SEQUENCE 545 AA; 63822 MW; 77F79377EF21492A CRC64;
MSNKFKKILV TCALPYANGP IHIGHMLEHI QADIWVRYQR MRNNEVWFIS SDDAHGTAIM
LKSEKLGITP IKLIKKIKEE HIIDFSNFNI SHDNYHSTHC VENLFLLRKI FLSLSEQKLI
NEKKIFQFYD NTKKMFLPDR FIKGTCPFCS SKNQNGDNCE ICGSIYEPTD LVNPISVISN
SVPILKNTTH LYFNLPLFTN MLNKWIHSGI LEKSVAKKTE EWLKSGLKEW GISRDAPYFG
FKIPKFDKKY FYVWLDAPVG YISAFKNFCT KNKKVDFNEF WKKESKCELY HFIGKDIIYF
HTLFWPAILE ASSYRKPNGI FVHGHLTING LKLSKSRGFL IKASDWIKCF DSDSLRYYYA
SKLSNNINDI EINLEDFIQK INSDIVNKLV NLASRNASFI HKYFDGYLAD SLGDCNLYQD
FIDISKKIAN FFENRQFSSV IRECMKLLDL ANQYINQREP WKIKQDNFNK LHTICTVGIN
LFRLVVIFLK PIIPDLAKKT EYFLISDLTW KGIDKPLLSH KIKKFKKLYN RINHDKILQL
SLLCK