SYP24_ARATH
ID SYP24_ARATH Reviewed; 416 AA.
AC Q9C615; Q9LQN2;
DT 31-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2001, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Putative syntaxin-24;
DE Short=AtSYP24;
GN Name=SYP24; OrderedLocusNames=At1g32270; ORFNames=F27G20_2, F5D14.3;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [2]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: Vesicle trafficking protein that functions in the secretory
CC pathway. {ECO:0000250}.
CC -!- SUBUNIT: Part of the t-SNARE complex. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the syntaxin family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAF81323.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AC007767; AAF81323.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AC084110; AAG60178.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE31458.1; -; Genomic_DNA.
DR PIR; C86447; C86447.
DR RefSeq; NP_174506.1; NM_102960.2.
DR AlphaFoldDB; Q9C615; -.
DR SMR; Q9C615; -.
DR STRING; 3702.AT1G32270.1; -.
DR PaxDb; Q9C615; -.
DR PRIDE; Q9C615; -.
DR EnsemblPlants; AT1G32270.1; AT1G32270.1; AT1G32270.
DR GeneID; 840119; -.
DR Gramene; AT1G32270.1; AT1G32270.1; AT1G32270.
DR KEGG; ath:AT1G32270; -.
DR Araport; AT1G32270; -.
DR TAIR; locus:2028336; AT1G32270.
DR eggNOG; KOG0811; Eukaryota.
DR HOGENOM; CLU_661140_0_0_1; -.
DR InParanoid; Q9C615; -.
DR OrthoDB; 1204812at2759; -.
DR PhylomeDB; Q9C615; -.
DR PRO; PR:Q9C615; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9C615; baseline and differential.
DR Genevisible; Q9C615; AT.
DR GO; GO:0012505; C:endomembrane system; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IBA:GO_Central.
DR GO; GO:0031201; C:SNARE complex; IBA:GO_Central.
DR GO; GO:0005484; F:SNAP receptor activity; IBA:GO_Central.
DR GO; GO:0000149; F:SNARE binding; IBA:GO_Central.
DR GO; GO:0006886; P:intracellular protein transport; IBA:GO_Central.
DR GO; GO:0048278; P:vesicle docking; IBA:GO_Central.
DR GO; GO:0006906; P:vesicle fusion; IBA:GO_Central.
DR InterPro; IPR004864; LEA_2.
DR InterPro; IPR010989; SNARE.
DR InterPro; IPR045242; Syntaxin.
DR InterPro; IPR006011; Syntaxin_N.
DR InterPro; IPR000727; T_SNARE_dom.
DR PANTHER; PTHR19957; PTHR19957; 1.
DR Pfam; PF03168; LEA_2; 1.
DR Pfam; PF05739; SNARE; 1.
DR Pfam; PF14523; Syntaxin_2; 1.
DR SMART; SM00397; t_SNARE; 1.
DR SUPFAM; SSF47661; SSF47661; 1.
DR PROSITE; PS50192; T_SNARE; 1.
PE 3: Inferred from homology;
KW Coiled coil; Protein transport; Reference proteome; Transport.
FT CHAIN 1..416
FT /note="Putative syntaxin-24"
FT /id="PRO_0000254012"
FT DOMAIN 265..326
FT /note="t-SNARE coiled-coil homology"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00202"
FT REGION 375..401
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 374..404
FT /evidence="ECO:0000255"
SQ SEQUENCE 416 AA; 47628 MW; 7113F755517970CB CRC64;
MVRSNDVKFQ VYDAELTHFD LESNNNLQYS LSLNLSIRNS KSSIGIHYDR FEATVYYMNQ
RLGAVPMPLF YLGSKNTMLL RALFEGQTLV LLKGNERKKF EDDQKTGVYR IDVKLSINFR
VMVLHLVTWP MKPVVRCHLK IPLALGSSNS TGGHKKMLLI GQLVKDTSAN LREASETDHR
RDVAQSKKIA DAKLAKDFEA ALKEFQKAQH ITVERETSYI PFDPKGSFSS SEVDIGYDRS
QEQRVLMESR RQEIVLLDNE ISLNEARIEA REQGIQEVKH QISEVMEMFK DLAVMVDHQG
TIDDIDEKID NLRSAAAQGK SHLVKASNTQ GSNSSLLFSC SLLLFFFLSG DLCRCVCVGS
ENPRLNPTRR KAWCEEEDEE QRKKQQKKKT MSEKRRREEK KVNKPNGFVF CVLGHK
