SYP72_ARATH
ID SYP72_ARATH Reviewed; 267 AA.
AC Q94KK6; Q9M3E9;
DT 12-FEB-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-DEC-2001, sequence version 1.
DT 25-MAY-2022, entry version 125.
DE RecName: Full=Syntaxin-72;
DE Short=AtSYP72;
GN Name=SYP72; OrderedLocusNames=At3g45280; ORFNames=F18N11.40;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RX PubMed=11739776; DOI=10.1091/mbc.12.12.3733;
RA Sanderfoot A.A., Kovaleva V., Bassham D.C., Raikhel N.V.;
RT "Interactions between syntaxins identify at least five SNARE complexes
RT within the Golgi/prevacuolar system of the Arabidopsis cell.";
RL Mol. Biol. Cell 12:3733-3743(2001).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130713; DOI=10.1038/35048706;
RA Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B.,
RA Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M.,
RA Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V.,
RA Choisne N., Artiguenave F., Robert C., Brottier P., Wincker P.,
RA Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M.,
RA Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H.,
RA Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H.,
RA Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A.,
RA Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H.,
RA Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J.,
RA Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B.,
RA Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D.,
RA de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E.,
RA Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G.,
RA Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X.,
RA Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M.,
RA Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B.,
RA Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J.,
RA Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C.,
RA Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y.,
RA Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K.,
RA Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A.,
RA Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T.,
RA Watanabe A., Yamada M., Yasuda M., Tabata S.;
RT "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana.";
RL Nature 408:820-822(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
CC -!- FUNCTION: Vesicle trafficking protein that functions in the secretory
CC pathway. {ECO:0000250}.
CC -!- SUBUNIT: Part of the t-SNARE complex. {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000250}; Single-pass type IV
CC membrane protein {ECO:0000250}.
CC -!- TISSUE SPECIFICITY: Expressed in root, leaf, stem, flower and silique.
CC -!- SIMILARITY: Belongs to the syntaxin family. {ECO:0000305}.
CC -!- SEQUENCE CAUTION:
CC Sequence=CAB72477.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AF355758; AAK40226.1; -; mRNA.
DR EMBL; AL132953; CAB72477.1; ALT_SEQ; Genomic_DNA.
DR EMBL; CP002686; AEE78017.1; -; Genomic_DNA.
DR EMBL; CP002686; ANM64890.1; -; Genomic_DNA.
DR RefSeq; NP_001319688.1; NM_001339202.1.
DR RefSeq; NP_566878.1; NM_114397.2.
DR AlphaFoldDB; Q94KK6; -.
DR SMR; Q94KK6; -.
DR IntAct; Q94KK6; 1.
DR STRING; 3702.AT3G45280.1; -.
DR PaxDb; Q94KK6; -.
DR ProteomicsDB; 233053; -.
DR EnsemblPlants; AT3G45280.1; AT3G45280.1; AT3G45280.
DR EnsemblPlants; AT3G45280.3; AT3G45280.3; AT3G45280.
DR GeneID; 823666; -.
DR Gramene; AT3G45280.1; AT3G45280.1; AT3G45280.
DR Gramene; AT3G45280.3; AT3G45280.3; AT3G45280.
DR KEGG; ath:AT3G45280; -.
DR Araport; AT3G45280; -.
DR TAIR; locus:2078282; AT3G45280.
DR eggNOG; ENOG502QS7N; Eukaryota.
DR HOGENOM; CLU_091888_0_0_1; -.
DR InParanoid; Q94KK6; -.
DR OMA; KYDADKH; -.
DR OrthoDB; 1423519at2759; -.
DR PhylomeDB; Q94KK6; -.
DR PRO; PR:Q94KK6; -.
DR Proteomes; UP000006548; Chromosome 3.
DR ExpressionAtlas; Q94KK6; baseline and differential.
DR Genevisible; Q94KK6; AT.
DR GO; GO:0012505; C:endomembrane system; IBA:GO_Central.
DR GO; GO:0016021; C:integral component of membrane; IBA:GO_Central.
DR GO; GO:0031201; C:SNARE complex; IBA:GO_Central.
DR GO; GO:0005484; F:SNAP receptor activity; IBA:GO_Central.
DR GO; GO:0000149; F:SNARE binding; IBA:GO_Central.
DR GO; GO:0006886; P:intracellular protein transport; IBA:GO_Central.
DR GO; GO:0048278; P:vesicle docking; IBA:GO_Central.
DR GO; GO:0006906; P:vesicle fusion; IBA:GO_Central.
DR InterPro; IPR045242; Syntaxin.
DR InterPro; IPR006012; Syntaxin/epimorphin_CS.
DR InterPro; IPR000727; T_SNARE_dom.
DR PANTHER; PTHR19957; PTHR19957; 1.
DR Pfam; PF05739; SNARE; 1.
DR SMART; SM00397; t_SNARE; 1.
DR PROSITE; PS00914; SYNTAXIN; 1.
DR PROSITE; PS50192; T_SNARE; 1.
PE 2: Evidence at transcript level;
KW Coiled coil; Membrane; Protein transport; Reference proteome;
KW Transmembrane; Transmembrane helix; Transport.
FT CHAIN 1..267
FT /note="Syntaxin-72"
FT /id="PRO_0000210265"
FT TOPO_DOM 1..244
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 245..265
FT /note="Helical; Anchor for type IV membrane protein"
FT /evidence="ECO:0000255"
FT TOPO_DOM 266..267
FT /note="Vesicular"
FT /evidence="ECO:0000255"
FT DOMAIN 173..235
FT /note="t-SNARE coiled-coil homology"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00202"
FT COILED 53..87
FT /evidence="ECO:0000255"
SQ SEQUENCE 267 AA; 30284 MW; 73DA647D7C0A6754 CRC64;
MPVIDIIFRV DEICKKYDKY DIDKHREIGA SGDDAFSRLF TSIDSDIEAV LRKAELASTE
KNRAAAVAMN AEVRRTKARL AEDVVKLQKL AVKKIKGLTR EERESRCDLV IALADRLQAI
PDGNEHGAKQ ANSDWGGASA PNKNIKFDMS EEDMDDGFFQ QSEESSQFRQ EYEMRRKKQD
EGLDIISEGL DALKNLARDM NEELDKQVPL MEEMETKVDG ATSDLKNTNV RLKKQLVQMR
SSRNFCIDII LLCVILGIVS YIYNALN