SYRD_PSESY
ID SYRD_PSESY Reviewed; 566 AA.
AC P33951;
DT 01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1994, sequence version 1.
DT 03-AUG-2022, entry version 117.
DE RecName: Full=ATP-binding protein SyrD;
GN Name=syrD;
OS Pseudomonas syringae pv. syringae.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas; Pseudomonas syringae.
OX NCBI_TaxID=321;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=B301D;
RX PubMed=8231810; DOI=10.1111/j.1365-2958.1993.tb01738.x;
RA Quigley N.B., Mo Y.-Y., Gross D.C.;
RT "SyrD is required for syringomycin production by Pseudomonas syringae
RT pathovar syringae and is related to a family of ATP-binding secretion
RT proteins.";
RL Mol. Microbiol. 9:787-801(1993).
CC -!- FUNCTION: ATP-driven efflux pump necessary for the secretion of
CC syringomycin. May specifically bind syringomycin and translocate it to
CC the periplasmic space. SyrD is also required for full expression of the
CC syrB gene.
CC -!- SUBUNIT: Dimer. {ECO:0000305}.
CC -!- SUBCELLULAR LOCATION: Cell inner membrane; Multi-pass membrane protein.
CC -!- SIMILARITY: Belongs to the ABC transporter superfamily. {ECO:0000305}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; M97223; AAA16337.1; -; Unassigned_DNA.
DR PIR; S37347; S37347.
DR RefSeq; WP_003408051.1; NZ_RBRX01000129.1.
DR AlphaFoldDB; P33951; -.
DR SMR; P33951; -.
DR TCDB; 3.A.1.113.1; the atp-binding cassette (abc) superfamily.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0140359; F:ABC-type transporter activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:1904680; F:peptide transmembrane transporter activity; IEA:InterPro.
DR GO; GO:0017000; P:antibiotic biosynthetic process; IEA:UniProtKB-KW.
DR GO; GO:0015833; P:peptide transport; IEA:InterPro.
DR Gene3D; 1.20.1560.10; -; 1.
DR Gene3D; 3.40.50.300; -; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR011527; ABC1_TM_dom.
DR InterPro; IPR036640; ABC1_TM_sf.
DR InterPro; IPR003439; ABC_transporter-like_ATP-bd.
DR InterPro; IPR017871; ABC_transporter-like_CS.
DR InterPro; IPR005898; Cyc_pep_transpt.
DR InterPro; IPR027417; P-loop_NTPase.
DR PANTHER; PTHR43553:SF11; PTHR43553:SF11; 1.
DR Pfam; PF00664; ABC_membrane; 1.
DR Pfam; PF00005; ABC_tran; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; SSF52540; 1.
DR SUPFAM; SSF90123; SSF90123; 1.
DR TIGRFAMs; TIGR01194; cyc_pep_trnsptr; 1.
DR PROSITE; PS50929; ABC_TM1F; 1.
DR PROSITE; PS00211; ABC_TRANSPORTER_1; 1.
DR PROSITE; PS50893; ABC_TRANSPORTER_2; 1.
PE 3: Inferred from homology;
KW Antibiotic biosynthesis; ATP-binding; Cell inner membrane; Cell membrane;
KW Membrane; Nucleotide-binding; Transmembrane; Transmembrane helix.
FT CHAIN 1..566
FT /note="ATP-binding protein SyrD"
FT /id="PRO_0000092983"
FT TRANSMEM 24..44
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TRANSMEM 61..81
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TRANSMEM 132..152
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TRANSMEM 158..178
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TRANSMEM 250..270
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT TRANSMEM 279..299
FT /note="Helical"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT DOMAIN 22..301
FT /note="ABC transmembrane type-1"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00441"
FT DOMAIN 343..566
FT /note="ABC transporter"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00434"
FT BINDING 380..387
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00434"
SQ SEQUENCE 566 AA; 63196 MW; 79EAA6267053B922 CRC64;
MKTKQEKKAR PGSIMRLLWS SHPWLTFFTL LTGLISGVAS IAVVNVINQA IHEETFQRQS
LFWFVGLSVV ALLFRNGASL FPAYASMRIM TRLRIALCRK ILGTPLEEVD RRGAPNVLTL
LTSDIPQLNA TLLIMPTILV ESAVFLFGIA YLAYLSWVVF AITISLMILG VAMYLLFFMG
GMKFTHKVRD EFTAFNEYTH ALVFGLKELK LNGIRRRWFS RSAIQESSVR VAKYNYIERL
WFTAAENVGQ LTLSLLVGCL LFAAPMFAVI DAKTMSASVL AVLYIMGPLV MLVSAMPMLA
QGRIACTRLA DFGFSINEPH PEPETSDADN VLLLDHKKSW GSIQLKNVHM NYKDPQSSSG
FALGPIDLTI HSGELVYIVG GNGCGKSTLA KVFCGLYIPQ EGQLLLDGAA VTDDSRGDYR
DLFSAVFSDF HLFNRLIGPD EKEHPSTDQA QTYLSTLGLE DKVKIEGLGY STTTALSYGQ
QKRLALVCAY LEDRPIYLLD EWAADQDPPF KRFFYEELLP DLKRRGKTIL IITHDDQYFQ
LADRIIKLAD GCIVSDVKCA VEGKRA