SYR_CLOD6
ID SYR_CLOD6 Reviewed; 566 AA.
AC Q189Q7;
DT 14-APR-2009, integrated into UniProtKB/Swiss-Prot.
DT 25-JUL-2006, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123};
DE EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};
DE AltName: Full=Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123};
DE Short=ArgRS {ECO:0000255|HAMAP-Rule:MF_00123};
GN Name=argS {ECO:0000255|HAMAP-Rule:MF_00123}; OrderedLocusNames=CD630_07110;
OS Clostridioides difficile (strain 630) (Peptoclostridium difficile).
OC Bacteria; Firmicutes; Clostridia; Eubacteriales; Peptostreptococcaceae;
OC Clostridioides.
OX NCBI_TaxID=272563;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=630;
RX PubMed=16804543; DOI=10.1038/ng1830;
RA Sebaihia M., Wren B.W., Mullany P., Fairweather N.F., Minton N.,
RA Stabler R., Thomson N.R., Roberts A.P., Cerdeno-Tarraga A.M., Wang H.,
RA Holden M.T.G., Wright A., Churcher C., Quail M.A., Baker S., Bason N.,
RA Brooks K., Chillingworth T., Cronin A., Davis P., Dowd L., Fraser A.,
RA Feltwell T., Hance Z., Holroyd S., Jagels K., Moule S., Mungall K.,
RA Price C., Rabbinowitsch E., Sharp S., Simmonds M., Stevens K., Unwin L.,
RA Whithead S., Dupuy B., Dougan G., Barrell B., Parkhill J.;
RT "The multidrug-resistant human pathogen Clostridium difficile has a highly
RT mobile, mosaic genome.";
RL Nat. Genet. 38:779-786(2006).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-
CC tRNA(Arg); Xref=Rhea:RHEA:20301, Rhea:RHEA-COMP:9658, Rhea:RHEA-
CC COMP:9673, ChEBI:CHEBI:30616, ChEBI:CHEBI:32682, ChEBI:CHEBI:33019,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78513, ChEBI:CHEBI:456215;
CC EC=6.1.1.19; Evidence={ECO:0000255|HAMAP-Rule:MF_00123};
CC -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_00123}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00123}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00123}.
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DR EMBL; AM180355; CAJ67544.1; -; Genomic_DNA.
DR RefSeq; WP_003436885.1; NZ_CP010905.2.
DR RefSeq; YP_001087187.1; NC_009089.1.
DR AlphaFoldDB; Q189Q7; -.
DR SMR; Q189Q7; -.
DR STRING; 272563.CD630_07110; -.
DR EnsemblBacteria; CAJ67544; CAJ67544; CD630_07110.
DR GeneID; 66353213; -.
DR KEGG; cdf:CD630_07110; -.
DR KEGG; pdc:CDIF630_00826; -.
DR PATRIC; fig|272563.120.peg.731; -.
DR eggNOG; COG0018; Bacteria.
DR OMA; NKPLHLG; -.
DR PhylomeDB; Q189Q7; -.
DR BioCyc; PDIF272563:G12WB-821-MON; -.
DR Proteomes; UP000001978; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd00671; ArgRS_core; 1.
DR Gene3D; 3.30.1360.70; -; 1.
DR Gene3D; 3.40.50.620; -; 1.
DR HAMAP; MF_00123; Arg_tRNA_synth; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR001278; Arg-tRNA-ligase.
DR InterPro; IPR005148; Arg-tRNA-synth_N.
DR InterPro; IPR036695; Arg-tRNA-synth_N_sf.
DR InterPro; IPR035684; ArgRS_core.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR PANTHER; PTHR11956; PTHR11956; 1.
DR Pfam; PF03485; Arg_tRNA_synt_N; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF00750; tRNA-synt_1d; 1.
DR PRINTS; PR01038; TRNASYNTHARG.
DR SMART; SM01016; Arg_tRNA_synt_N; 1.
DR SMART; SM00836; DALR_1; 1.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF55190; SSF55190; 1.
DR TIGRFAMs; TIGR00456; argS; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..566
FT /note="Arginine--tRNA ligase"
FT /id="PRO_1000198887"
FT MOTIF 123..133
FT /note="'HIGH' region"
SQ SEQUENCE 566 AA; 64990 MW; 767922C7C06F0B64 CRC64;
MQDFKVAISN CLKEKIEDLS KEEIEALIEV PPNKDMGDYA FPCFKLAKVF RKAPNMIASE
LAESIEPSGE ITKVIQLGGY VNFFVNKSQL AETVIKKVLD EKENYGHSDF GKDKTVIVEY
SSPNIAKPFH IGHIRTTVIG NALYKIYDSQ GYKTIRINHL GDYGTQFGKL IVAFKKWGEK
EVVESNPIPE LLKLYVRFHD EAEQHPEMED EARAWFNKLE NGDEEAQELW QWFRNESLKE
FNRVYKLLDI EFDSLAGESF YSDKMNRVIE LLEEKNLLKE SKGARIVDLE EYKMPPALIT
KNDGSTLYMT RDLAAAIYRK ETYDFDKCIY VVGSQQNLHF QQWFKVIELM GYDWAKDLIH
VGFGMVALEE GTMSTRKGRV VFLEDALNQA IDKTKEIILA KNPNAKNVDE ISKQVGVGAV
VFQELSNSRI KDYTFSWERT LSFDGETGPY VQYTHARCCA VLRKAEVEVT SDIDYSLLAD
EDSAEVLRVI ESFNKNILLA LKKNEPHIVT RFMLDLAQAF NKFYHDNPIL VENLEIRKAR
LALVLATKQT LENSLKLLGM HAPERM