SYR_PROMP
ID SYR_PROMP Reviewed; 603 AA.
AC Q7V396;
DT 15-DEC-2003, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 25-MAY-2022, entry version 105.
DE RecName: Full=Arginine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00123};
DE EC=6.1.1.19 {ECO:0000255|HAMAP-Rule:MF_00123};
DE AltName: Full=Arginyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00123};
DE Short=ArgRS {ECO:0000255|HAMAP-Rule:MF_00123};
GN Name=argS {ECO:0000255|HAMAP-Rule:MF_00123}; OrderedLocusNames=PMM0187;
OS Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / NIES-2087 /
OS MED4).
OC Bacteria; Cyanobacteria; Synechococcales; Prochlorococcaceae;
OC Prochlorococcus.
OX NCBI_TaxID=59919;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CCMP1986 / NIES-2087 / MED4;
RX PubMed=12917642; DOI=10.1038/nature01947;
RA Rocap G., Larimer F.W., Lamerdin J.E., Malfatti S., Chain P., Ahlgren N.A.,
RA Arellano A., Coleman M., Hauser L., Hess W.R., Johnson Z.I., Land M.L.,
RA Lindell D., Post A.F., Regala W., Shah M., Shaw S.L., Steglich C.,
RA Sullivan M.B., Ting C.S., Tolonen A., Webb E.A., Zinser E.R.,
RA Chisholm S.W.;
RT "Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche
RT differentiation.";
RL Nature 424:1042-1047(2003).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-
CC tRNA(Arg); Xref=Rhea:RHEA:20301, Rhea:RHEA-COMP:9658, Rhea:RHEA-
CC COMP:9673, ChEBI:CHEBI:30616, ChEBI:CHEBI:32682, ChEBI:CHEBI:33019,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78513, ChEBI:CHEBI:456215;
CC EC=6.1.1.19; Evidence={ECO:0000255|HAMAP-Rule:MF_00123};
CC -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_00123}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_00123}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC {ECO:0000255|HAMAP-Rule:MF_00123}.
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DR EMBL; BX548174; CAE18646.1; -; Genomic_DNA.
DR RefSeq; WP_011131826.1; NC_005072.1.
DR AlphaFoldDB; Q7V396; -.
DR SMR; Q7V396; -.
DR STRING; 59919.PMM0187; -.
DR EnsemblBacteria; CAE18646; CAE18646; PMM0187.
DR KEGG; pmm:PMM0187; -.
DR eggNOG; COG0018; Bacteria.
DR HOGENOM; CLU_006406_5_1_3; -.
DR OMA; NKPLHLG; -.
DR OrthoDB; 1146366at2; -.
DR Proteomes; UP000001026; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0004814; F:arginine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006420; P:arginyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd00671; ArgRS_core; 1.
DR Gene3D; 3.30.1360.70; -; 1.
DR Gene3D; 3.40.50.620; -; 1.
DR HAMAP; MF_00123; Arg_tRNA_synth; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR001278; Arg-tRNA-ligase.
DR InterPro; IPR005148; Arg-tRNA-synth_N.
DR InterPro; IPR036695; Arg-tRNA-synth_N_sf.
DR InterPro; IPR035684; ArgRS_core.
DR InterPro; IPR008909; DALR_anticod-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR PANTHER; PTHR11956; PTHR11956; 1.
DR Pfam; PF03485; Arg_tRNA_synt_N; 1.
DR Pfam; PF05746; DALR_1; 1.
DR Pfam; PF00750; tRNA-synt_1d; 1.
DR PRINTS; PR01038; TRNASYNTHARG.
DR SMART; SM01016; Arg_tRNA_synt_N; 1.
DR SMART; SM00836; DALR_1; 1.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF55190; SSF55190; 1.
DR TIGRFAMs; TIGR00456; argS; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..603
FT /note="Arginine--tRNA ligase"
FT /id="PRO_0000151591"
FT MOTIF 141..151
FT /note="'HIGH' region"
SQ SEQUENCE 603 AA; 69644 MW; 0457AA70B1F5A62B CRC64;
MQTIFKELTK SFEETLLESL IKNEKKEEFE KIRKNLINQA SKEEFGDYQC NICLVLSKIY
KSNPREIAIA FIETLKENKK ISNLCENLEI AGPGFINIKL KNKVLIEAIK SNIKCPRAGV
PLSHKNNIYS KKKVIVDFSS PNIAKEMHVG HLRSTIIGDS ISKIFEFRGY IVLRLNHIGD
WGTQFGMLIT QLKDLYSSDL KEIDRIKISD LVEFYKASKK RFDNETEFQK RSREEVVQLQ
SGDKKSIEAW KLLCNQSRKE FDQIYKTLNI KIKERGESFY NPFLKSIIED LNYKKILIED
QGAKCVFLDG MTNKEGNPLP LIIQKKDGGF NYATTDLAAL RYRFTKEPYG DNAARIIYVT
DHGQSNHFAG VFQVAKRANW IPKDCEVNHV PFGLVQGIDG KKLKTREGDT IKLKDLLSES
VKRAKEDLLK RLENESRFEN DDFVLNTSKV IGIGAVKYAD LSQNRITNYQ FSFEKMLSLN
GNTAPYLLYT LVRISGINRK NNMTEEAINL ESISYSHDLE WKLIRKLLKF DEVIISIEKD
LMPNRLCNYL FELCKTFNRF YDQVPILKGE IDTKISRLTL CALTEKTLKL SLELLGIETL
ERM