BODG_PSESK
ID BODG_PSESK Reviewed; 383 AA.
AC P80193;
DT 01-APR-1993, integrated into UniProtKB/Swiss-Prot.
DT 01-APR-1993, sequence version 1.
DT 03-AUG-2022, entry version 82.
DE RecName: Full=Gamma-butyrobetaine dioxygenase;
DE EC=1.14.11.1;
DE AltName: Full=Gamma-butyrobetaine hydroxylase;
DE Short=Gamma-BBH;
DE AltName: Full=Gamma-butyrobetaine,2-oxoglutarate dioxygenase;
OS Pseudomonas sp. (strain AK-1).
OC Bacteria; Proteobacteria.
OX NCBI_TaxID=29440;
RN [1]
RP PROTEIN SEQUENCE.
RX PubMed=8504802; DOI=10.1111/j.1432-1033.1993.tb17855.x;
RA Rueetschi U., Nordin I., Odelhoeg B., Joernvall H., Lindstedt S.;
RT "Gamma-butyrobetaine hydroxylase. Structural characterization of the
RT Pseudomonas enzyme.";
RL Eur. J. Biochem. 213:1075-1080(1993).
CC -!- FUNCTION: Catalyzes the formation of L-carnitine from gamma-
CC butyrobetaine.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=2-oxoglutarate + 4-(trimethylamino)butanoate + O2 = carnitine
CC + CO2 + succinate; Xref=Rhea:RHEA:24028, ChEBI:CHEBI:15379,
CC ChEBI:CHEBI:16244, ChEBI:CHEBI:16526, ChEBI:CHEBI:16810,
CC ChEBI:CHEBI:17126, ChEBI:CHEBI:30031; EC=1.14.11.1;
CC -!- COFACTOR:
CC Name=Fe(2+); Xref=ChEBI:CHEBI:29033; Evidence={ECO:0000250};
CC Note=Binds 1 Fe(2+) ion per subunit. {ECO:0000250};
CC -!- COFACTOR:
CC Name=L-ascorbate; Xref=ChEBI:CHEBI:38290;
CC -!- PATHWAY: Amine and polyamine biosynthesis; carnitine biosynthesis.
CC -!- SUBUNIT: Homodimer.
CC -!- SUBCELLULAR LOCATION: Cytoplasm.
CC -!- SIMILARITY: Belongs to the gamma-BBH/TMLD family. {ECO:0000305}.
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DR AlphaFoldDB; P80193; -.
DR SMR; P80193; -.
DR ChEMBL; CHEMBL3817724; -.
DR PRIDE; P80193; -.
DR BioCyc; MetaCyc:MON-8461; -.
DR BRENDA; 1.14.11.1; 5085.
DR UniPathway; UPA00118; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0008336; F:gamma-butyrobetaine dioxygenase activity; IEA:UniProtKB-EC.
DR GO; GO:0005506; F:iron ion binding; IEA:InterPro.
DR GO; GO:0045329; P:carnitine biosynthetic process; IEA:UniProtKB-UniPathway.
DR Gene3D; 3.30.2020.30; -; 1.
DR Gene3D; 3.60.130.10; -; 1.
DR InterPro; IPR012775; GBBH.
DR InterPro; IPR010376; GBBH-like_N.
DR InterPro; IPR038492; GBBH-like_N_sf.
DR InterPro; IPR042098; TauD-like_sf.
DR InterPro; IPR003819; TauD/TfdA-like.
DR Pfam; PF06155; GBBH-like_N; 1.
DR Pfam; PF02668; TauD; 1.
DR TIGRFAMs; TIGR02409; carnitine_bodg; 1.
PE 1: Evidence at protein level;
KW Carnitine biosynthesis; Cytoplasm; Dioxygenase; Direct protein sequencing;
KW Iron; Metal-binding; Oxidoreductase; Zinc.
FT CHAIN 1..383
FT /note="Gamma-butyrobetaine dioxygenase"
FT /id="PRO_0000207089"
FT BINDING 46
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 48
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 51
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 91
FT /ligand="Zn(2+)"
FT /ligand_id="ChEBI:CHEBI:29105"
FT /evidence="ECO:0000250"
FT BINDING 209
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000250"
FT BINDING 211
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000250"
FT BINDING 350
FT /ligand="Fe cation"
FT /ligand_id="ChEBI:CHEBI:24875"
FT /ligand_note="catalytic"
FT /evidence="ECO:0000250"
FT VARIANT 1
FT /note="Missing (in 50% of the chains)"
SQ SEQUENCE 383 AA; 43322 MW; 1A16205902C92DB9 CRC64;
NAIADYRTFP LISPLASAAS FASGVSVTWA DGRVSPFHNL WLRDNCPCGD CVYEVTREQV
FLVADVPEDI QVQAVTIGDD GRLVVQWDDG HASAYHPGWL RAHAYDAQSL AEREAARPHK
HRWMQGLSLP VYDHGAVMQD DDTLLEWLLA VRDVGLTQLH GVPTEPGALI PLAKRISFIR
ESNFGVLFDV RSKADADSNA YTAFNLPLHT DLPTRELQPG LQFLHCLVND ATGGNSTFVD
GFAIAEALRI EAPAAYRLLC ETPVEFRNKD RHSDYRCTAP VIALDSSGEV REIRLANFLR
APFQMDAQRM PDYYLAYRRF IQMTREPRFC FTRRLEAGQL WCFDNRRVLH ARDAFDPASG
DRHFQGCYVD RDELLSRILV LQR