SYTC2_DICDI
ID SYTC2_DICDI Reviewed; 698 AA.
AC Q8MP20; Q555M0; Q8T175;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 120.
DE RecName: Full=Probable threonine--tRNA ligase 2, cytoplasmic;
DE EC=6.1.1.3;
DE AltName: Full=Threonyl-tRNA synthetase;
DE Short=ThrRS;
GN Name=thrS2; ORFNames=DDB_G0274545;
OS Dictyostelium discoideum (Slime mold).
OC Eukaryota; Amoebozoa; Evosea; Eumycetozoa; Dictyostelia; Dictyosteliales;
OC Dictyosteliaceae; Dictyostelium.
OX NCBI_TaxID=44689;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=12097910; DOI=10.1038/nature00847;
RA Gloeckner G., Eichinger L., Szafranski K., Pachebat J.A., Bankier A.T.,
RA Dear P.H., Lehmann R., Baumgart C., Parra G., Abril J.F., Guigo R.,
RA Kumpf K., Tunggal B., Cox E.C., Quail M.A., Platzer M., Rosenthal A.,
RA Noegel A.A.;
RT "Sequence and analysis of chromosome 2 of Dictyostelium discoideum.";
RL Nature 418:79-85(2002).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=AX4;
RX PubMed=15875012; DOI=10.1038/nature03481;
RA Eichinger L., Pachebat J.A., Gloeckner G., Rajandream M.A., Sucgang R.,
RA Berriman M., Song J., Olsen R., Szafranski K., Xu Q., Tunggal B.,
RA Kummerfeld S., Madera M., Konfortov B.A., Rivero F., Bankier A.T.,
RA Lehmann R., Hamlin N., Davies R., Gaudet P., Fey P., Pilcher K., Chen G.,
RA Saunders D., Sodergren E.J., Davis P., Kerhornou A., Nie X., Hall N.,
RA Anjard C., Hemphill L., Bason N., Farbrother P., Desany B., Just E.,
RA Morio T., Rost R., Churcher C.M., Cooper J., Haydock S., van Driessche N.,
RA Cronin A., Goodhead I., Muzny D.M., Mourier T., Pain A., Lu M., Harper D.,
RA Lindsay R., Hauser H., James K.D., Quiles M., Madan Babu M., Saito T.,
RA Buchrieser C., Wardroper A., Felder M., Thangavelu M., Johnson D.,
RA Knights A., Loulseged H., Mungall K.L., Oliver K., Price C., Quail M.A.,
RA Urushihara H., Hernandez J., Rabbinowitsch E., Steffen D., Sanders M.,
RA Ma J., Kohara Y., Sharp S., Simmonds M.N., Spiegler S., Tivey A.,
RA Sugano S., White B., Walker D., Woodward J.R., Winckler T., Tanaka Y.,
RA Shaulsky G., Schleicher M., Weinstock G.M., Rosenthal A., Cox E.C.,
RA Chisholm R.L., Gibbs R.A., Loomis W.F., Platzer M., Kay R.R.,
RA Williams J.G., Dear P.H., Noegel A.A., Barrell B.G., Kuspa A.;
RT "The genome of the social amoeba Dictyostelium discoideum.";
RL Nature 435:43-57(2005).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-threonine + tRNA(Thr) = AMP + diphosphate + H(+) + L-
CC threonyl-tRNA(Thr); Xref=Rhea:RHEA:24624, Rhea:RHEA-COMP:9670,
CC Rhea:RHEA-COMP:9704, ChEBI:CHEBI:15378, ChEBI:CHEBI:30616,
CC ChEBI:CHEBI:33019, ChEBI:CHEBI:57926, ChEBI:CHEBI:78442,
CC ChEBI:CHEBI:78534, ChEBI:CHEBI:456215; EC=6.1.1.3;
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the class-II aminoacyl-tRNA synthetase family.
CC {ECO:0000305}.
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DR EMBL; AC123513; AAM44378.1; -; Genomic_DNA.
DR EMBL; AAFI02000012; EAL70165.1; -; Genomic_DNA.
DR RefSeq; XP_644046.1; XM_638954.1.
DR AlphaFoldDB; Q8MP20; -.
DR SMR; Q8MP20; -.
DR STRING; 44689.DDB0231249; -.
DR PaxDb; Q8MP20; -.
DR PRIDE; Q8MP20; -.
DR EnsemblProtists; EAL70165; EAL70165; DDB_G0274545.
DR GeneID; 8619476; -.
DR KEGG; ddi:DDB_G0274545; -.
DR dictyBase; DDB_G0274545; thrS2.
DR eggNOG; KOG1637; Eukaryota.
DR HOGENOM; CLU_008554_0_1_1; -.
DR InParanoid; Q8MP20; -.
DR OMA; HRNETHG; -.
DR PhylomeDB; Q8MP20; -.
DR PRO; PR:Q8MP20; -.
DR Proteomes; UP000002195; Chromosome 2.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004829; F:threonine-tRNA ligase activity; ISS:dictyBase.
DR GO; GO:0006435; P:threonyl-tRNA aminoacylation; IBA:GO_Central.
DR CDD; cd00771; ThrRS_core; 1.
DR Gene3D; 3.10.20.30; -; 1.
DR Gene3D; 3.30.930.10; -; 1.
DR Gene3D; 3.40.50.800; -; 1.
DR InterPro; IPR002314; aa-tRNA-synt_IIb.
DR InterPro; IPR006195; aa-tRNA-synth_II.
DR InterPro; IPR045864; aa-tRNA-synth_II/BPL/LPL.
DR InterPro; IPR004154; Anticodon-bd.
DR InterPro; IPR036621; Anticodon-bd_dom_sf.
DR InterPro; IPR012675; Beta-grasp_dom_sf.
DR InterPro; IPR004095; TGS.
DR InterPro; IPR002320; Thr-tRNA-ligase_IIa.
DR InterPro; IPR018163; Thr/Ala-tRNA-synth_IIc_edit.
DR InterPro; IPR033728; ThrRS_core.
DR PANTHER; PTHR11451; PTHR11451; 1.
DR Pfam; PF03129; HGTP_anticodon; 1.
DR Pfam; PF00587; tRNA-synt_2b; 1.
DR PRINTS; PR01047; TRNASYNTHTHR.
DR SUPFAM; SSF55186; SSF55186; 1.
DR SUPFAM; SSF55681; SSF55681; 1.
DR TIGRFAMs; TIGR00418; thrS; 1.
DR PROSITE; PS50862; AA_TRNA_LIGASE_II; 1.
DR PROSITE; PS51880; TGS; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..698
FT /note="Probable threonine--tRNA ligase 2, cytoplasmic"
FT /id="PRO_0000333832"
FT DOMAIN 38..100
FT /note="TGS"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU01228"
FT REGION 541..560
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 698 AA; 81318 MW; C08DC679012694A1 CRC64;
MSFLKLTKSI QKINNFNNNK INLINKYFST TNINNSGGGG NIKLNDGRIF KFEDKQTPLT
IANKINKTIG KQSILSRLNG NKLISMKEII EMSGKDYNIE FLNFEEHSDA RICFWNSSSL
VLARATMEYF KNENKEIELI NFGHLVNPQT ADNINQGTFY IDIFFKDKNQ TIKDNDINKI
KKIMEYIVKR NDKFEILKND QQDQDQDQEE SFIKFGEFKF KNNFLTIDSS NSIVSLDLIK
NSSVVGPNKE YSELQRIVGI SFPSKDQMNN WVEIQKIAAL RDHRVIGKDQ ELFFFHPFSP
GSCFFLPHGT KIYNKLLQFL RLEYRKRGYQ EVISPNIYNQ KLWETSGHWD NYKDNMFSFE
CDHTQYSLKP MNCPGHCLMY AHRARSYKEL PMRIADFGVL HRNETHGSLS GLTRVRRFQQ
DDAHIFCTPD MIREEIKQCL DFMKYVYTIF NFTFHLELST RPDSYLGELS VWEKAETSLS
QVLTEFCGDK WTINHGDGAF YGPKIDIHLK DANGKNHQCA TIQLDFQLPI RFNLEYSGGL
NNNNNNNNNN EEINDNNNNN SLNRPVMIHR ALFGSVERMM AILMEHTAGK WPFWLSPRQC
IVIPVSNKFN QFAQEIQSKI NLAGYDVDVD LNDSKLLSKK IREATVSQYN YIIVVGQEEI
DTNILNVRKR DLPEDNKQVK LSLNDLFSEF KLNIEQFK