BOP1B_XENLA
ID BOP1B_XENLA Reviewed; 728 AA.
AC Q7ZXX9;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-JUN-2003, sequence version 1.
DT 03-AUG-2022, entry version 91.
DE RecName: Full=Ribosome biogenesis protein bop1-B {ECO:0000255|HAMAP-Rule:MF_03027};
DE AltName: Full=Block of proliferation 1 protein B {ECO:0000255|HAMAP-Rule:MF_03027};
GN Name=bop1-b;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JAN-2003) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the PeBoW complex, which is required for
CC maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S
CC ribosome. {ECO:0000255|HAMAP-Rule:MF_03027}.
CC -!- SUBUNIT: Component of the PeBoW complex, composed of bop1, pes1 and
CC wdr12. The complex is held together by bop1, which interacts with pes1
CC via its N-terminal domain and with wdr12 via a high-affinity
CC interaction between the seven-bladed beta-propeller domains of the 2
CC proteins. The PeBoW complex associates with the 66S pre-ribosome.
CC {ECO:0000255|HAMAP-Rule:MF_03027}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000255|HAMAP-
CC Rule:MF_03027}. Nucleus, nucleoplasm {ECO:0000255|HAMAP-Rule:MF_03027}.
CC -!- SIMILARITY: Belongs to the WD repeat BOP1/ERB1 family.
CC {ECO:0000255|HAMAP-Rule:MF_03027}.
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DR EMBL; BC044074; AAH44074.1; -; mRNA.
DR RefSeq; NP_001080358.1; NM_001086889.1.
DR AlphaFoldDB; Q7ZXX9; -.
DR SMR; Q7ZXX9; -.
DR DNASU; 380050; -.
DR GeneID; 380050; -.
DR KEGG; xla:380050; -.
DR CTD; 380050; -.
DR Xenbase; XB-GENE-6254226; bop1.L.
DR OrthoDB; 759498at2759; -.
DR Proteomes; UP000186698; Chromosome 6L.
DR Bgee; 380050; Expressed in oocyte and 19 other tissues.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0070545; C:PeBoW complex; ISS:UniProtKB.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IEA:UniProtKB-UniRule.
DR GO; GO:0043021; F:ribonucleoprotein complex binding; IEA:UniProtKB-UniRule.
DR GO; GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
DR GO; GO:0051726; P:regulation of cell cycle; ISS:UniProtKB.
DR Gene3D; 2.130.10.10; -; 1.
DR HAMAP; MF_03027; BOP1; 1.
DR InterPro; IPR028598; BOP1/Erb1.
DR InterPro; IPR012953; BOP1_N_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR17605; PTHR17605; 1.
DR Pfam; PF08145; BOP1NT; 1.
DR Pfam; PF00400; WD40; 3.
DR SMART; SM01035; BOP1NT; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; Repeat; Ribosome biogenesis; rRNA processing;
KW WD repeat.
FT CHAIN 1..728
FT /note="Ribosome biogenesis protein bop1-B"
FT /id="PRO_0000370389"
FT REPEAT 393..432
FT /note="WD 1"
FT REPEAT 434..474
FT /note="WD 2"
FT REPEAT 514..556
FT /note="WD 3"
FT REPEAT 559..597
FT /note="WD 4"
FT REPEAT 600..639
FT /note="WD 5"
FT REPEAT 643..682
FT /note="WD 6"
FT REPEAT 698..728
FT /note="WD 7"
FT REGION 1..114
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1..33
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 64..114
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 728 AA; 83465 MW; C51F4712E4B3531B CRC64;
MKRGSKRESG GPLTEEPEPL FSEENRSLQD GNPLDESDSE ESQYSGLEDS GTDSSDDEED
HSSEEVQDPG KSPKEIIKVP HRTSKSQADS PADEEDQPNE IKEYENDSSD EEDIRNTVGN
IPMEWYKDLP HIGYDLDGRK IFKPLRSKDQ LEEFLDKMEN PDYWRTVHDK KTGQDIKLTD
EQVDLVERLQ KGQFGDLNYD PYQPAIDFFT HETMIHPVTN RPADKRSFIP SLIEKEKVSK
LVHAIKMGWI QPRKPRDDAP TYYDLWAKED PNAILGRHKM HVPAPKLPLP GHEQSYNPPP
EYLMSEEERL AWEQQDPEDR KLPFLPQRFN CLRAVPGYAR FIHERFERCL DLYLCPRQRK
MRVNVDPEDL IPKLPKPRDL QPFPTIQSMI YKGHKDLVRC ISVSPSGQWL VSGSDDCSVR
FWEVSTGRCM KSVVLEGAVK SISWNPNPVL VLVAACVDRS VVLINPGLGD RLLCSATDQH
ISGYQPPEEE VQQPVTWEEA EGSEYSSGLR LWIKHQKEVK QVTFHARGDY FAVVLPDNGN
SQVLIHQLSR RRSQNPFRKN KGQVQKVLFH PTRPFFFVAT QRYVRVYNLL KQELTKKLLT
NCKWVSSIAV HPAGDNLICG SYDSKLAWFD MDLSTKPYKV LRHHKKALRA VSFHKSYPLF
ASGSDDASVI VCHGMVYNDL LQNPLIVPVK VLRGHAIHRD LGVLDVMFHP TQPWVFSSGA
DGTIRLFT