BOP1_MONBE
ID BOP1_MONBE Reviewed; 799 AA.
AC A9UZS7;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 05-FEB-2008, sequence version 1.
DT 25-MAY-2022, entry version 64.
DE RecName: Full=Ribosome biogenesis protein BOP1 homolog {ECO:0000255|HAMAP-Rule:MF_03027};
GN ORFNames=37129;
OS Monosiga brevicollis (Choanoflagellate).
OC Eukaryota; Choanoflagellata; Craspedida; Salpingoecidae; Monosiga.
OX NCBI_TaxID=81824;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=MX1 / ATCC 50154;
RX PubMed=18273011; DOI=10.1038/nature06617;
RG JGI Sequencing;
RA King N., Westbrook M.J., Young S.L., Kuo A., Abedin M., Chapman J.,
RA Fairclough S., Hellsten U., Isogai Y., Letunic I., Marr M., Pincus D.,
RA Putnam N., Rokas A., Wright K.J., Zuzow R., Dirks W., Good M.,
RA Goodstein D., Lemons D., Li W., Lyons J.B., Morris A., Nichols S.,
RA Richter D.J., Salamov A., Bork P., Lim W.A., Manning G., Miller W.T.,
RA McGinnis W., Shapiro H., Tjian R., Grigoriev I.V., Rokhsar D.;
RT "The genome of the choanoflagellate Monosiga brevicollis and the origin of
RT metazoans.";
RL Nature 451:783-788(2008).
CC -!- FUNCTION: Required for maturation of ribosomal RNAs and formation of
CC the large ribosomal subunit. {ECO:0000255|HAMAP-Rule:MF_03027}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000255|HAMAP-
CC Rule:MF_03027}. Nucleus, nucleoplasm {ECO:0000255|HAMAP-Rule:MF_03027}.
CC -!- SIMILARITY: Belongs to the WD repeat BOP1/ERB1 family.
CC {ECO:0000255|HAMAP-Rule:MF_03027}.
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DR EMBL; CH991551; EDQ89285.1; -; Genomic_DNA.
DR RefSeq; XP_001745861.1; XM_001745809.1.
DR AlphaFoldDB; A9UZS7; -.
DR SMR; A9UZS7; -.
DR STRING; 81824.XP_001745861.1; -.
DR EnsemblProtists; EDQ89285; EDQ89285; MONBRDRAFT_37129.
DR GeneID; 5891182; -.
DR KEGG; mbr:MONBRDRAFT_37129; -.
DR eggNOG; KOG0650; Eukaryota.
DR InParanoid; A9UZS7; -.
DR OMA; MRPAKGE; -.
DR Proteomes; UP000001357; Unassembled WGS sequence.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0070545; C:PeBoW complex; IBA:GO_Central.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IBA:GO_Central.
DR GO; GO:0043021; F:ribonucleoprotein complex binding; IBA:GO_Central.
DR GO; GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IBA:GO_Central.
DR Gene3D; 2.130.10.10; -; 1.
DR HAMAP; MF_03027; BOP1; 1.
DR InterPro; IPR028598; BOP1/Erb1.
DR InterPro; IPR012953; BOP1_N_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR17605; PTHR17605; 1.
DR Pfam; PF08145; BOP1NT; 1.
DR Pfam; PF00400; WD40; 2.
DR SMART; SM01035; BOP1NT; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 3: Inferred from homology;
KW Nucleus; Reference proteome; Repeat; Ribosome biogenesis; rRNA processing;
KW WD repeat.
FT CHAIN 1..799
FT /note="Ribosome biogenesis protein BOP1 homolog"
FT /id="PRO_0000370409"
FT REPEAT 457..498
FT /note="WD 1"
FT REPEAT 500..538
FT /note="WD 2"
FT REPEAT 584..626
FT /note="WD 3"
FT REPEAT 629..669
FT /note="WD 4"
FT REPEAT 670..709
FT /note="WD 5"
FT REPEAT 713..752
FT /note="WD 6"
FT REPEAT 769..799
FT /note="WD 7"
FT REGION 1..171
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 9..41
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 94..124
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 125..160
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 799 AA; 90954 MW; 948F863E691DC070 CRC64;
MPRRVRAQKR TAGVVEDEEV KAEQVRREHK AKQKQAVGSD AEQEEEELFP DSLHGPDSES
DVTDDEQIDE EARQADRDLL KELVTLQGLN GEDPSDADND DDDDEEEAAS DDDDEEEDAE
PSSDSSNEAS DAGQEEGTTD PHTTTDDKAS ATTQMVVYSS DDDTSDEEHS LNRVGRIPME
WYEDYEHIGY DLNGKRIRKP KQKDRLEKFL DAFEAGNNGR TIYDPVTGKE IELTDDDINM
IKRIQSGQLP DTGINPYEDY VDFFTHEKMQ TPVVDKPEPK RRFVPSKWEH KKIMKIVRSI
RKGLIKLPTS DDEKDKSSEE EQYYDVWGNE DDPNDPRIKV RQANHIAAPK VALPHHAESY
NPPEEYLPTD AEAEKWRNAH EDDRERNYLP HKYGSLRLVP AYDQYIQERF HRCLDLYLCP
RARRIRMNVD PEDLLPKLPK PEDLQPFPSA PSLVYRGHKA RVTSISCDPT GQWLVSGSDD
KTIRVWEIST GRCVRVVTVD AEVNMVAWCP NAGVSIVAVA HGHTVSLICP RVATAAIDKA
TAVLCNQSIE KPSQGAEEGM RATPTWNRIR GERQDQDGIF FEIPHHAEVM QVTWHHKGNY
FASVMPRAET QSVCVHSLNR QSTQHPFQKR NRDVQRVLFH PTQPLFFVAT KTHVRVYNLQ
AQALVKKLLT GVRWLSSLAI HPAGDNLIIG SYDKRLCWFD MDLSIKPYKI LRYHKYALRQ
VCFHKKYPIF ASCGDDGNVH VLHGMVYNDL GQNPLIVPVK IIKAHNQTSD GMGVMDCTFH
PSQPWLFSAG SDGSIKLHV