BOP1_XENTR
ID BOP1_XENTR Reviewed; 729 AA.
AC A4IHS2;
DT 05-MAY-2009, integrated into UniProtKB/Swiss-Prot.
DT 01-MAY-2007, sequence version 1.
DT 03-AUG-2022, entry version 61.
DE RecName: Full=Ribosome biogenesis protein bop1 {ECO:0000255|HAMAP-Rule:MF_03027};
DE AltName: Full=Block of proliferation 1 protein {ECO:0000255|HAMAP-Rule:MF_03027};
GN Name=bop1;
OS Xenopus tropicalis (Western clawed frog) (Silurana tropicalis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana.
OX NCBI_TaxID=8364;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (MAR-2007) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: Component of the PeBoW complex, which is required for
CC maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S
CC ribosome. {ECO:0000255|HAMAP-Rule:MF_03027}.
CC -!- SUBUNIT: Component of the PeBoW complex, composed of bop1, pes1 and
CC wdr12. The complex is held together by bop1, which interacts with pes1
CC via its N-terminal domain and with wdr12 via a high-affinity
CC interaction between the seven-bladed beta-propeller domains of the 2
CC proteins. The PeBoW complex associates with the 66S pre-ribosome.
CC {ECO:0000255|HAMAP-Rule:MF_03027}.
CC -!- SUBCELLULAR LOCATION: Nucleus, nucleolus {ECO:0000255|HAMAP-
CC Rule:MF_03027}. Nucleus, nucleoplasm {ECO:0000255|HAMAP-Rule:MF_03027}.
CC -!- SIMILARITY: Belongs to the WD repeat BOP1/ERB1 family.
CC {ECO:0000255|HAMAP-Rule:MF_03027}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; BC135662; AAI35663.1; -; mRNA.
DR RefSeq; NP_001096309.1; NM_001102839.1.
DR AlphaFoldDB; A4IHS2; -.
DR SMR; A4IHS2; -.
DR DNASU; 100124887; -.
DR GeneID; 100124887; -.
DR KEGG; xtr:100124887; -.
DR CTD; 23246; -.
DR Xenbase; XB-GENE-6454222; bop1.
DR InParanoid; A4IHS2; -.
DR OrthoDB; 759498at2759; -.
DR Proteomes; UP000008143; Chromosome 6.
DR Proteomes; UP000790000; Unplaced.
DR GO; GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0070545; C:PeBoW complex; ISS:UniProtKB.
DR GO; GO:0030687; C:preribosome, large subunit precursor; IBA:GO_Central.
DR GO; GO:0043021; F:ribonucleoprotein complex binding; IBA:GO_Central.
DR GO; GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IEA:UniProtKB-UniRule.
DR GO; GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
DR GO; GO:0051726; P:regulation of cell cycle; ISS:UniProtKB.
DR Gene3D; 2.130.10.10; -; 1.
DR HAMAP; MF_03027; BOP1; 1.
DR InterPro; IPR028598; BOP1/Erb1.
DR InterPro; IPR012953; BOP1_N_dom.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR17605; PTHR17605; 1.
DR Pfam; PF08145; BOP1NT; 1.
DR Pfam; PF00400; WD40; 3.
DR SMART; SM01035; BOP1NT; 1.
DR SMART; SM00320; WD40; 7.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 1.
DR PROSITE; PS50082; WD_REPEATS_2; 1.
DR PROSITE; PS50294; WD_REPEATS_REGION; 2.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; Repeat; Ribosome biogenesis; rRNA processing;
KW WD repeat.
FT CHAIN 1..729
FT /note="Ribosome biogenesis protein bop1"
FT /id="PRO_0000370390"
FT REPEAT 394..433
FT /note="WD 1"
FT REPEAT 435..475
FT /note="WD 2"
FT REPEAT 515..557
FT /note="WD 3"
FT REPEAT 560..598
FT /note="WD 4"
FT REPEAT 601..640
FT /note="WD 5"
FT REPEAT 644..683
FT /note="WD 6"
FT REPEAT 699..729
FT /note="WD 7"
FT REGION 1..115
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 71..115
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 729 AA; 83015 MW; DF25D502A263158E CRC64;
MKKGSKREAG GPQAEQPEPL FSGEDRSLSD GNIVDESDSE ESQYSGLEDS GSDSTEDEEE
HSSEEIQQNP GKSPKEIRKV PHRPSKSEAN SAAAEEDKPS AAKEYENDSS DEEDIRNTVG
NIPMEWYQDF PHIGYDLDGR KIFKPLRSKD QLEQFLDKME NPDYWRTVHD KKTGQDVRLT
DEQVDLVERL QRGQFGDINY DPYQPSIDFF THETMIHPVT NRPADKRSFI PSLIEKEKVS
KLVHAIKMGW IQPRKPRDDS PAYYDLWAKE DPNAILGRHK MHVPAPKLPL PGHEQSYNPP
PEYLMSEEER LAWEQQDPED RKVPFLPQRF PCLRAVPGYA RFIHERFERC LDLYLCPRQR
KMRVNVDPED LIPKLPKPRD LQPFPTVQSL IYRGHKDLVR CISVAPSGQW LVSGSDDCTV
RFWEVGTGRC MKSVLLEGAV KSISWNPNPG LVLVAACVEH SVVLINPGLG DRLLCGATDQ
HIGGYQPPEE EGQQPVSWGE AEGTEYSNGL RLCIKHQKAV KQVTWHARGD YFAVVLPDNG
NSQVLIHQLS RRRSQNPFRK NKGQVQKVLF HPTRPFFFVA TQRCVRVYNL LKQELSKKLL
TNCKWVSSIA VHPAGDNLIC GSYDSKLAWF DMDLSTKPYK VLRHHKKALR AVSYHKQYPL
FASGSDDGSV IVCHGMVYND LLQNPLIVPV KVLRGHAIHR DLGVLDVIFH PTQPWVFSSG
ADATIRLYT