SYV_AERPE
ID SYV_AERPE Reviewed; 823 AA.
AC Q9YAZ0;
DT 24-JAN-2001, integrated into UniProtKB/Swiss-Prot.
DT 10-JUL-2007, sequence version 3.
DT 03-AUG-2022, entry version 113.
DE RecName: Full=Valine--tRNA ligase;
DE EC=6.1.1.9;
DE AltName: Full=Valyl-tRNA synthetase;
DE Short=ValRS;
GN Name=valS; OrderedLocusNames=APE_1805.1;
OS Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 /
OS K1).
OC Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales;
OC Desulfurococcaceae; Aeropyrum.
OX NCBI_TaxID=272557;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1;
RX PubMed=10382966; DOI=10.1093/dnares/6.2.83;
RA Kawarabayasi Y., Hino Y., Horikawa H., Yamazaki S., Haikawa Y., Jin-no K.,
RA Takahashi M., Sekine M., Baba S., Ankai A., Kosugi H., Hosoyama A.,
RA Fukui S., Nagai Y., Nishijima K., Nakazawa H., Takamiya M., Masuda S.,
RA Funahashi T., Tanaka T., Kudoh Y., Yamazaki J., Kushida N., Oguchi A.,
RA Aoki K., Kubota K., Nakamura Y., Nomura N., Sako Y., Kikuchi H.;
RT "Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon,
RT Aeropyrum pernix K1.";
RL DNA Res. 6:83-101(1999).
CC -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC inadvertently accommodate and process structurally similar amino acids
CC such as threonine, to avoid such errors, it has a 'posttransfer'
CC editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC dependent manner (By similarity). {ECO:0000250}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250}.
CC -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC one for editing. The misactivated threonine is translocated from the
CC active site to the editing site (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC ValS type 2 subfamily. {ECO:0000305}.
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DR EMBL; BA000002; BAA80808.2; -; Genomic_DNA.
DR PIR; C72565; C72565.
DR AlphaFoldDB; Q9YAZ0; -.
DR SMR; Q9YAZ0; -.
DR STRING; 272557.APE_1805.1; -.
DR PRIDE; Q9YAZ0; -.
DR EnsemblBacteria; BAA80808; BAA80808; APE_1805.1.
DR KEGG; ape:APE_1805.1; -.
DR PATRIC; fig|272557.25.peg.1210; -.
DR eggNOG; arCOG00808; Archaea.
DR Proteomes; UP000002518; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0004832; F:valine-tRNA ligase activity; IEA:UniProtKB-EC.
DR GO; GO:0006438; P:valyl-tRNA aminoacylation; IEA:InterPro.
DR CDD; cd07962; Anticodon_Ia_Val; 1.
DR Gene3D; 3.40.50.620; -; 2.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033705; Anticodon_Ia_Val.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR002303; Valyl-tRNA_ligase.
DR PANTHER; PTHR11946; PTHR11946; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 1.
DR PRINTS; PR00986; TRNASYNTHVAL.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..823
FT /note="Valine--tRNA ligase"
FT /id="PRO_0000106247"
FT BINDING 547
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250"
SQ SEQUENCE 823 AA; 95247 MW; A98A47A49073F8C2 CRC64;
MGEEFKPAIQ EKRWDIGEEE KLLSLWDAED LHKSTLDPDD PREIVVIDTP PPYPSGKWHV
GGAAHYTQID MIARYFRLKG YNVVAPFYAD RNGLPVEVQV EKTYGVVAHE MARTTEGRER
FLALCSEFLD KVESEIVQLW RRLGCGFDYW REGTDSPRYR SMTQATFIDL WRRGLIYEAE
RPVRWCPRCK TTLAEAEIEH KEDEDFIYYV KYRLEEDGRD LVVATTRPEL LAGCAALAYH
PEDERYKGLA GKTAIAPLYG HRVKIVEHPA VKKDFGTGLM MICSYGDEED VRLFLELDLK
PKVLIDENGV MNENAGPIAG LPVKEARRRI AEILEREGLL VKKERIVHSV PVCWRCKTPL
QIIHRRELFL RQLDFKDAVK QAAAKMDFKP EMHRKKLYDW IDSIKMDWPI SRERFYGTEI
PLWTCEKCGA KLVPEPGRYY RPWAEEPPWD SCPRCGAPRR YLKGETRVFD TWFDSSISPL
YVTRWMWDKR FYERASRNVL RPQGQDIIRT WLYYSILRVL QLTGKPAFRW VRITGLGLDP
KGRPMHKSLG NVIDPEPIIA KYGGDAFRFW AAIAAKLGYD YRFDENKVKT GRNFATKLWN
LARFVSSFPR PEGSPLEKAT EVDKAFLALA DEYLEAADKA YGELDVYEPA NLIYELAWDI
FASHYVELVK ERSYNRSGLF TREEQEAAWA TLHELLRRIL VALSPIMPFV TDAIHRRLYG
SSVHRQRWPD PLFTPEERRE LAGKARLIVS VNKAVWNLKR SMGKKLYEPL DTVEVLVPSG
IESARRDLEA LHKAAIRTYT GAPPEGSEEA IPGSSVYYIA KKS