SYV_AQUAE
ID SYV_AQUAE Reviewed; 1165 AA.
AC O67411;
DT 30-MAY-2000, integrated into UniProtKB/Swiss-Prot.
DT 01-AUG-1998, sequence version 1.
DT 03-AUG-2022, entry version 135.
DE RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004};
DE EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};
DE AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004};
DE Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};
GN Name=valS {ECO:0000255|HAMAP-Rule:MF_02004}; OrderedLocusNames=aq_1413;
OS Aquifex aeolicus (strain VF5).
OC Bacteria; Aquificae; Aquificales; Aquificaceae; Aquifex.
OX NCBI_TaxID=224324;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=VF5;
RX PubMed=9537320; DOI=10.1038/32831;
RA Deckert G., Warren P.V., Gaasterland T., Young W.G., Lenox A.L.,
RA Graham D.E., Overbeek R., Snead M.A., Keller M., Aujay M., Huber R.,
RA Feldman R.A., Short J.M., Olsen G.J., Swanson R.V.;
RT "The complete genome of the hyperthermophilic bacterium Aquifex aeolicus.";
RL Nature 392:353-358(1998).
CC -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC inadvertently accommodate and process structurally similar amino acids
CC such as threonine, to avoid such errors, it has a 'posttransfer'
CC editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC dependent manner. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_02004};
CC -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC one for editing. The misactivated threonine is translocated from the
CC active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- DOMAIN: The C-terminal coiled-coil domain is crucial for aminoacylation
CC activity. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC ValS type 1 subfamily. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; AE000657; AAC07375.1; -; Genomic_DNA.
DR PIR; A70423; A70423.
DR RefSeq; NP_213976.1; NC_000918.1.
DR RefSeq; WP_010880914.1; NC_000918.1.
DR AlphaFoldDB; O67411; -.
DR SMR; O67411; -.
DR STRING; 224324.aq_1413; -.
DR PRIDE; O67411; -.
DR EnsemblBacteria; AAC07375; AAC07375; aq_1413.
DR KEGG; aae:aq_1413; -.
DR PATRIC; fig|224324.8.peg.1107; -.
DR eggNOG; COG0525; Bacteria.
DR HOGENOM; CLU_001493_0_1_0; -.
DR InParanoid; O67411; -.
DR OMA; HNIKSHF; -.
DR OrthoDB; 32262at2; -.
DR Proteomes; UP000000798; Chromosome.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004832; F:valine-tRNA ligase activity; IBA:GO_Central.
DR GO; GO:0006438; P:valyl-tRNA aminoacylation; IBA:GO_Central.
DR CDD; cd07962; Anticodon_Ia_Val; 1.
DR Gene3D; 1.10.287.380; -; 1.
DR Gene3D; 3.40.50.620; -; 3.
DR Gene3D; 3.90.740.10; -; 2.
DR HAMAP; MF_02004; Val_tRNA_synth_type1; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033705; Anticodon_Ia_Val.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR010978; tRNA-bd_arm.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR037118; Val-tRNA_synth_C_sf.
DR InterPro; IPR019499; Val-tRNA_synth_tRNA-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR002303; Valyl-tRNA_ligase.
DR PANTHER; PTHR11946; PTHR11946; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 3.
DR Pfam; PF10458; Val_tRNA-synt_C; 1.
DR PRINTS; PR00986; TRNASYNTHVAL.
DR SUPFAM; SSF46589; SSF46589; 1.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Coiled coil; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..1165
FT /note="Valine--tRNA ligase"
FT /id="PRO_0000106211"
FT COILED 1001..1032
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
FT COILED 1097..1165
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
FT MOTIF 43..53
FT /note="'HIGH' region"
FT MOTIF 800..804
FT /note="'KMSKS' region"
FT BINDING 803
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
SQ SEQUENCE 1165 AA; 137151 MW; E612D4F28EF4A237 CRC64;
MEIKEYNPRE IEEKWSRYWI EKALYHVEKP DKRKKFSVVI PPPNVTGSLH MGHALNATLQ
DVIVRWQRMR GRECVWVPGF DHAGIATQYV VEKQLAKEGK SRLELGREEF LKKVWEWVPK
SRNAIRTQLT KLGVSVDWKR ERFTLDEGFS RAVRKAFRTL FEEGLIYRAE YIVNWCPNDR
TALSDLEVEY EEEKGSLWYI KYPIVDENGK DTGEFITVAT TRPETMLGDT AVAVNPNDDR
YKHLVGKRAR LPLVNWERKD LRGNSVSNLI PIIADERVKM DFGTGAVKIT PAHDPLDFEI
GKTHDLPFVR VIDETGRMNE NAGDFAGMDR YEAREAIVAK LREDELLEKE EEITHSVGHC
YRCKTVIEPM VSVQWFVKVS DPRIKDISIK VVEEGIKERE EKELFVQLAQ VEELSVVIPL
KEEGRHKIVV VLDKTAKFLV GKREGELAYI YYPKGDERTL EFAKRLAEEF KDYEFMVAYE
GLPKIVVMGN EQLVEPGSYL FVYDGKKLDL YKLEGEKPKF LKTLGKGEAD LEVTQKSIQI
KPERIKKVEE REKRVKFIPE HWKKFYLDWM YNLKDWCISR QIWWGHRIPV WYCKDCGNVN
VFTDDDFDRA HDKIIFNLIA DGKIDQEFTP EEVEKVLKSP HFVHPEMTVL DFYKKFVFHR
YYNMDITADS LRLLFTQDMN PMAMLTPGVS TRNIYKYDSQ KKKWKMVLRC KKCGSENLEQ
ERDVLDTWFS SALWPFGVFG WPESTEDLKN LYPTDLLVTG FDIIFFWVAR MIMMGTHFMK
DIPFYDVYVH ALVRDKYGRK MSKTIGNVID PLDIIERYGA DALRFTLAIL TVQGRDIKLA
EEKFEGYKHF ANKIWNAARY VLMNTPEDFI ARIPYMAPLK PEDKWIITKL NETAEEVNKA
LENYQYSQAA HAIYEFFWSD YCDWYIEFTK ERIYKKAPED NEEEKAKVEN ERTTALYTLH
YVLEKALRIL HPFMPYITEE LWHKLPNAEG ESISLAEFPQ KNEDEIYEED KQKVERLKEI
ISAIRAIRSD LQIKPSEKIK ASFKTESEFS RRVIQEFKNH ILNLAKLESF EEVSQRPQNT
VATFSKDTEI YVHIEGHVDL DKLIQSYEKK REKLLKELER VNKKLSNENF LKKAPVEVVE
KEKQIKEELE NDLKKVEEIL KVLRS