SYV_BARHE
ID SYV_BARHE Reviewed; 907 AA.
AC Q6G2V3;
DT 07-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 106.
DE RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004};
DE EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};
DE AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004};
DE Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};
GN Name=valS {ECO:0000255|HAMAP-Rule:MF_02004}; OrderedLocusNames=BH10630;
OS Bartonella henselae (strain ATCC 49882 / DSM 28221 / Houston 1)
OS (Rochalimaea henselae).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales;
OC Bartonellaceae; Bartonella.
OX NCBI_TaxID=283166;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 49882 / DSM 28221 / Houston 1;
RX PubMed=15210978; DOI=10.1073/pnas.0305659101;
RA Alsmark U.C.M., Frank A.C., Karlberg E.O., Legault B.-A., Ardell D.H.,
RA Canbaeck B., Eriksson A.-S., Naeslund A.K., Handley S.A., Huvet M.,
RA La Scola B., Holmberg M., Andersson S.G.E.;
RT "The louse-borne human pathogen Bartonella quintana is a genomic derivative
RT of the zoonotic agent Bartonella henselae.";
RL Proc. Natl. Acad. Sci. U.S.A. 101:9716-9721(2004).
CC -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC inadvertently accommodate and process structurally similar amino acids
CC such as threonine, to avoid such errors, it has a 'posttransfer'
CC editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC dependent manner. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_02004};
CC -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC one for editing. The misactivated threonine is translocated from the
CC active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- DOMAIN: The C-terminal coiled-coil domain is crucial for aminoacylation
CC activity. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC ValS type 1 subfamily. {ECO:0000255|HAMAP-Rule:MF_02004}.
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DR EMBL; BX897699; CAF27854.1; -; Genomic_DNA.
DR RefSeq; WP_011180924.1; NZ_LRIJ02000001.1.
DR AlphaFoldDB; Q6G2V3; -.
DR SMR; Q6G2V3; -.
DR STRING; 283166.BH10630; -.
DR PaxDb; Q6G2V3; -.
DR PRIDE; Q6G2V3; -.
DR EnsemblBacteria; CAF27854; CAF27854; BH10630.
DR GeneID; 64157273; -.
DR KEGG; bhe:BH10630; -.
DR eggNOG; COG0525; Bacteria.
DR OMA; FATKLWN; -.
DR Proteomes; UP000000421; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004832; F:valine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006438; P:valyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd07962; Anticodon_Ia_Val; 1.
DR Gene3D; 1.10.287.380; -; 1.
DR Gene3D; 3.40.50.620; -; 2.
DR Gene3D; 3.90.740.10; -; 1.
DR HAMAP; MF_02004; Val_tRNA_synth_type1; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033705; Anticodon_Ia_Val.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR010978; tRNA-bd_arm.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR037118; Val-tRNA_synth_C_sf.
DR InterPro; IPR019499; Val-tRNA_synth_tRNA-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR002303; Valyl-tRNA_ligase.
DR PANTHER; PTHR11946; PTHR11946; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 1.
DR Pfam; PF10458; Val_tRNA-synt_C; 1.
DR PRINTS; PR00986; TRNASYNTHVAL.
DR SUPFAM; SSF46589; SSF46589; 1.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
DR TIGRFAMs; TIGR00422; valS; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Coiled coil; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..907
FT /note="Valine--tRNA ligase"
FT /id="PRO_0000224440"
FT COILED 838..870
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
FT MOTIF 45..55
FT /note="'HIGH' region"
FT MOTIF 554..558
FT /note="'KMSKS' region"
FT BINDING 557
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
SQ SEQUENCE 907 AA; 103385 MW; CA334E7F733CBCB3 CRC64;
MLEKNYDAAS IEQRIAKKWE ARGAFKAGMG SKSAAQSFCV MLPPPNVTGS LHMGHALNTT
IQDIVVRFQR MRGKNVLWQP GMDHAGIATQ MVVERQLAER QEPTRQEMGR EKFVERIWEW
RYETGGVIAN QLRRLGVSCD WSRERFTMDD GLSEAVREVF VTLYKQGLIY RDKRLVNWDP
KLLTAISDLE VEQKEVKGHL WHFRYPLEGK LFDPSDATTF ITVATTRPET MLGDTGIAVN
PEDDRYRNLI GQNAILPLVG RRLSIVADAY ANPDEGSGAV KITPAHDFND FEVGRRNNLR
LINIFTEKAE VFLHENEAFF EGVVLSDALK MLVKDLDQKD RFIARDQIVS LMEEKGYLVT
VDDHPHTVPY GDRSGVPIEP FLTDQWYVNA AELAKPAIEA VHQGKTQFIP DSWQKTYFNW
MQNIQPWCVS RQLWWGHQIP AWYGPDGRVF VEKSEEEALN SALSHYGEVV NLTRDPDVLD
TWFSSALWPF STLGWPNKTP ELATFYPTSL SVTGFDIIFF WVARMMMMGL HFMGEVPFPT
VYVHALVRDQ KGAKMSKSKG NIIDPLELID QYSADSLRFT LAIMAAQGRD VKLDPSRIAG
YRNFATKLWN ATRFAQMNGV KHDPDFKPEK AKLALNRWIL TELSKTVVAV TTGIENYKFN
ESASALYRFI WNTLCDWYLE LLKPIFQGSN EDAKNEVQAC TAWVLDEVYK LLHPFMPHMT
EELWSLTETL GMKREDMLAL IQWPEASFSD EEAASDINWL IDAVSAIRSV RFEMNIPAAA
LAPLVIVEGG ELTLKRVELY ESLLKKLARV ETISFSDKAP ALSAQMILGE AIFCLPLGQL
IDLEAERARL MKDVSKIEQD IEKLSAKLSN PKFIENAKPE IVEVERNRIV ELRTAQKKIS
LALERLV