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SYV_CERSK
ID   SYV_CERSK               Reviewed;         987 AA.
AC   B9KMT9;
DT   28-JUL-2009, integrated into UniProtKB/Swiss-Prot.
DT   24-MAR-2009, sequence version 1.
DT   03-AUG-2022, entry version 75.
DE   RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004};
DE            EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};
DE   AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004};
DE            Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};
GN   Name=valS {ECO:0000255|HAMAP-Rule:MF_02004};
GN   OrderedLocusNames=RSKD131_0291;
OS   Cereibacter sphaeroides (strain KD131 / KCTC 12085) (Rhodobacter
OS   sphaeroides).
OC   Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales;
OC   Rhodobacteraceae; Cereibacter.
OX   NCBI_TaxID=557760;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=KD131 / KCTC 12085;
RX   PubMed=19028901; DOI=10.1128/jb.01565-08;
RA   Lim S.-K., Kim S.J., Cha S.H., Oh Y.-K., Rhee H.-J., Kim M.-S., Lee J.K.;
RT   "Complete genome sequence of Rhodobacter sphaeroides KD131.";
RL   J. Bacteriol. 191:1118-1119(2009).
CC   -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC       inadvertently accommodate and process structurally similar amino acids
CC       such as threonine, to avoid such errors, it has a 'posttransfer'
CC       editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC       dependent manner. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC         tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC         COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC         ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_02004};
CC   -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC       one for editing. The misactivated threonine is translocated from the
CC       active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- DOMAIN: The C-terminal coiled-coil domain is crucial for aminoacylation
CC       activity. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC       ValS type 1 subfamily. {ECO:0000255|HAMAP-Rule:MF_02004}.
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DR   EMBL; CP001150; ACM00151.1; -; Genomic_DNA.
DR   RefSeq; WP_012643613.1; NC_011963.1.
DR   AlphaFoldDB; B9KMT9; -.
DR   SMR; B9KMT9; -.
DR   EnsemblBacteria; ACM00151; ACM00151; RSKD131_0291.
DR   GeneID; 67445770; -.
DR   KEGG; rsk:RSKD131_0291; -.
DR   HOGENOM; CLU_001493_0_2_5; -.
DR   OMA; FATKLWN; -.
DR   Proteomes; UP000001597; Chromosome 1.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0004832; F:valine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006438; P:valyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR   CDD; cd07962; Anticodon_Ia_Val; 1.
DR   Gene3D; 1.10.287.380; -; 1.
DR   Gene3D; 3.40.50.620; -; 3.
DR   Gene3D; 3.90.740.10; -; 2.
DR   HAMAP; MF_02004; Val_tRNA_synth_type1; 1.
DR   InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR   InterPro; IPR002300; aa-tRNA-synth_Ia.
DR   InterPro; IPR033705; Anticodon_Ia_Val.
DR   InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR   InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR   InterPro; IPR010978; tRNA-bd_arm.
DR   InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR   InterPro; IPR037118; Val-tRNA_synth_C_sf.
DR   InterPro; IPR019499; Val-tRNA_synth_tRNA-bd.
DR   InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR   InterPro; IPR002303; Valyl-tRNA_ligase.
DR   PANTHER; PTHR11946; PTHR11946; 1.
DR   Pfam; PF08264; Anticodon_1; 1.
DR   Pfam; PF00133; tRNA-synt_1; 2.
DR   Pfam; PF10458; Val_tRNA-synt_C; 1.
DR   PRINTS; PR00986; TRNASYNTHVAL.
DR   SUPFAM; SSF46589; SSF46589; 1.
DR   SUPFAM; SSF47323; SSF47323; 1.
DR   SUPFAM; SSF50677; SSF50677; 1.
DR   PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE   3: Inferred from homology;
KW   Aminoacyl-tRNA synthetase; ATP-binding; Coiled coil; Cytoplasm; Ligase;
KW   Nucleotide-binding; Protein biosynthesis.
FT   CHAIN           1..987
FT                   /note="Valine--tRNA ligase"
FT                   /id="PRO_1000189243"
FT   COILED          917..987
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
FT   MOTIF           45..55
FT                   /note="'HIGH' region"
FT   MOTIF           634..638
FT                   /note="'KMSKS' region"
FT   BINDING         637
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
SQ   SEQUENCE   987 AA;  110778 MW;  3827264B62149193 CRC64;
     MPMDKTFNAA EAEARLYDAW EKAGAFRAGA NASRPETFCI MIPPPNVTGS LHMGHAFNNT
     LQDILTRWHR MRGFDTLWQP GQDHAGIATQ MVVERELARA GNPGRREMGR EAFLEKVWEW
     KEQSGGTIVN QLKRLGASCD WSRNAFTMDP NFQRAVLKVF VDLYEKGFIY RGKRLVNWDP
     HFETAISDLE VEQVEVNGNM WRLRYRLADG ATYRHPVAFD EEGRPTDWEE RDYLTVATTR
     PETMLGDTGI AVNPSDERYA HLIGKEVVLP LVGRRIPIVA DDYADPSKGT GAVKITPAHD
     FNDWGVGQRT GLRAINVMTG RATMFLIENP DFTEGCAPSE EALALDGLDR YEARKRVVAL
     AEEQGWLDGI DQDRHMVPHG DRSKVAIEPM LTDQWFVDTA QIIQPAIDAV RTGRTEILPE
     RDAKTYFHWL ENIEPWCISR QLWWGHQIPV WYGLDIWPAR FEDDGDDTLD EVEIFELLED
     GAFNHADPTH HCAFDFEGVS EKFLDDLASL PHPLNNARVI EVASRAEAID RLAQALADYN
     LNEDPTHLVY PVWRDPDVLD TWFSSGLWPI GTLGWPEETP ELARYFPTNV LITGFDIIFF
     WVARMMMMQL AVVNEVPFKT VYVHALVRDE KGKKMSKSLG NVLDPLELID EFGADAVRFT
     LTAMAAMGRD LKLSTARIQG YRNFGTKLWN ACRFAEMNGV WEGHATQAAP PAATATVNRW
     IIGETGRVRE EVDAALAAYR FDSAANALYA FVWGKVCDWY VEFSKPLFDT EAAAETRATM
     GWVLDQCMVL LHPIMPFITE DLWATTGSRT KMLVHTDWPS FGAELVDPAA DREMSWVISL
     IEEIRSARAQ VHVPAGLKLP VVQLALDAVG REALARNEAL ILRLARLEGF TEAASAPKGA
     LTIAVEGGSF AIPLEGVIDI GAEKARLAKT LEKLEKDMAG LRGRLNNPNF VASAPEEVVD
     EARTRLEQGE EERAKLSAAL ARLSEIA
 
 
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