SYV_CLOAB
ID SYV_CLOAB Reviewed; 881 AA.
AC Q97GG8;
DT 07-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2001, sequence version 1.
DT 03-AUG-2022, entry version 109.
DE RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004};
DE EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};
DE AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004};
DE Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};
GN Name=valS {ECO:0000255|HAMAP-Rule:MF_02004}; OrderedLocusNames=CA_C2399;
OS Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710
OS / VKM B-1787).
OC Bacteria; Firmicutes; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=272562;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787;
RX PubMed=11466286; DOI=10.1128/jb.183.16.4823-4838.2001;
RA Noelling J., Breton G., Omelchenko M.V., Makarova K.S., Zeng Q., Gibson R.,
RA Lee H.M., Dubois J., Qiu D., Hitti J., Wolf Y.I., Tatusov R.L., Sabathe F.,
RA Doucette-Stamm L.A., Soucaille P., Daly M.J., Bennett G.N., Koonin E.V.,
RA Smith D.R.;
RT "Genome sequence and comparative analysis of the solvent-producing
RT bacterium Clostridium acetobutylicum.";
RL J. Bacteriol. 183:4823-4838(2001).
CC -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC inadvertently accommodate and process structurally similar amino acids
CC such as threonine, to avoid such errors, it has a 'posttransfer'
CC editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC dependent manner. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_02004};
CC -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC one for editing. The misactivated threonine is translocated from the
CC active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- DOMAIN: The C-terminal coiled-coil domain is crucial for aminoacylation
CC activity. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC ValS type 1 subfamily. {ECO:0000255|HAMAP-Rule:MF_02004}.
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DR EMBL; AE001437; AAK80354.1; -; Genomic_DNA.
DR PIR; G97195; G97195.
DR RefSeq; NP_349014.1; NC_003030.1.
DR RefSeq; WP_010965695.1; NC_003030.1.
DR AlphaFoldDB; Q97GG8; -.
DR SMR; Q97GG8; -.
DR STRING; 272562.CA_C2399; -.
DR EnsemblBacteria; AAK80354; AAK80354; CA_C2399.
DR GeneID; 44998879; -.
DR KEGG; cac:CA_C2399; -.
DR PATRIC; fig|272562.8.peg.2596; -.
DR eggNOG; COG0525; Bacteria.
DR HOGENOM; CLU_001493_0_2_9; -.
DR OMA; FATKLWN; -.
DR OrthoDB; 32262at2; -.
DR Proteomes; UP000000814; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004832; F:valine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006438; P:valyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd07962; Anticodon_Ia_Val; 1.
DR Gene3D; 1.10.287.380; -; 1.
DR Gene3D; 3.40.50.620; -; 2.
DR HAMAP; MF_02004; Val_tRNA_synth_type1; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033705; Anticodon_Ia_Val.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR010978; tRNA-bd_arm.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR037118; Val-tRNA_synth_C_sf.
DR InterPro; IPR019499; Val-tRNA_synth_tRNA-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR002303; Valyl-tRNA_ligase.
DR PANTHER; PTHR11946; PTHR11946; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 1.
DR Pfam; PF10458; Val_tRNA-synt_C; 1.
DR PRINTS; PR00986; TRNASYNTHVAL.
DR SUPFAM; SSF46589; SSF46589; 1.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
DR TIGRFAMs; TIGR00422; valS; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Coiled coil; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..881
FT /note="Valine--tRNA ligase"
FT /id="PRO_0000224461"
FT COILED 721..747
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
FT COILED 811..881
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
FT MOTIF 48..58
FT /note="'HIGH' region"
FT MOTIF 527..531
FT /note="'KMSKS' region"
FT BINDING 530
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
SQ SEQUENCE 881 AA; 102021 MW; 3ADF33DE57CFAF79 CRC64;
MKEFDEMAKT YDPKEFEDRI YKWWEEEGFF TPKVDKNKKP YTIMMPPPNI TGKLHLGHAL
DCALQDFMIR AKRMQGYEAL WLPGQDHASI ATEVRVEKEI LKEGLNKKEM GREKFLERVW
DWTKEYRERI KGQQKKLGVS ADFTRESFTM DEKLNKAVRT VFVKLYEDGL IYQGNRITNW
CPKCQTALSD AEIEYKEDQG FFWHIKYPVE GEDSFIEIAT TRPETMLGDT AVAVNPKDER
YKEFIGKLLV LPLLGRKIPV VADDYVDMEF GTGAVKITPA HDPNDYEVGK RHDLKEIVML
NNDGTIKEGF GKYSGMDRYE ARKAIVSDLK EEGYLVKIKE HVHNVGTHDR CGNIIEPMVS
KQWYVKMESL AKPAIEAVKA GKTKFVPERF DKIYFNWMEN IQDWCISRQL WWGHRIPVWY
CKDCGEIIVS EKEPKACSKC NSENLEQDKD VLDTWFSSAL WPFSTLGWPD KNEDLEYFYP
TDTLVTGYDI IFFWVARMVF SGIYNMGEVP FKHVYIHGLV RDAEGRKMSK SLGNGVDPLD
VIDTFGADAL RFMLITGNAP GNDIRYKTEK VEAARNFANK IWNASRFVLM NLDKEIMDKY
KDLEEYSLAD RWILSRCNSL VREVTDNIEK FELGIASQKV YDFMWNEFCD WYIELVKPVM
YGEDEKAKGI AYNVLYKVLT VGLQLLHPVM PYITEEIYQH LGGEYKAIAI SAWPTYEEKL
KNETSENAMN QIIEAIKSIR NVRAEMNVPP SKKAKVMIFT EAENKAAFEM GEHYFEKLAY
ASSVSFLKSK DEAPENAVSS VTKGAELFMP LLDLIDVTKE IERLSKEKDK LKAEIQRVDK
KLSNKGFVDK APESVVEAER VKGEKYKKML EAVEERIAAL K