SYV_EHRCJ
ID SYV_EHRCJ Reviewed; 802 AA.
AC Q3YT16;
DT 07-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 27-SEP-2005, sequence version 1.
DT 03-AUG-2022, entry version 100.
DE RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02005};
DE EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02005};
DE AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02005};
DE Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02005};
GN Name=valS {ECO:0000255|HAMAP-Rule:MF_02005}; OrderedLocusNames=Ecaj_0088;
OS Ehrlichia canis (strain Jake).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
OC Anaplasmataceae; Ehrlichia.
OX NCBI_TaxID=269484;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Jake;
RX PubMed=16707693; DOI=10.1128/jb.01837-05;
RA Mavromatis K., Doyle C.K., Lykidis A., Ivanova N., Francino M.P., Chain P.,
RA Shin M., Malfatti S., Larimer F., Copeland A., Detter J.C., Land M.,
RA Richardson P.M., Yu X.J., Walker D.H., McBride J.W., Kyrpides N.C.;
RT "The genome of the obligately intracellular bacterium Ehrlichia canis
RT reveals themes of complex membrane structure and immune evasion
RT strategies.";
RL J. Bacteriol. 188:4015-4023(2006).
CC -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC inadvertently accommodate and process structurally similar amino acids
CC such as threonine, to avoid such errors, it has a 'posttransfer'
CC editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC dependent manner. {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_02005};
CC -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC one for editing. The misactivated threonine is translocated from the
CC active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC ValS type 2 subfamily. {ECO:0000255|HAMAP-Rule:MF_02005}.
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DR EMBL; CP000107; AAZ68139.1; -; Genomic_DNA.
DR RefSeq; WP_011304217.1; NC_007354.1.
DR AlphaFoldDB; Q3YT16; -.
DR SMR; Q3YT16; -.
DR STRING; 269484.Ecaj_0088; -.
DR EnsemblBacteria; AAZ68139; AAZ68139; Ecaj_0088.
DR KEGG; ecn:Ecaj_0088; -.
DR eggNOG; COG0525; Bacteria.
DR HOGENOM; CLU_001493_0_2_5; -.
DR OMA; RQWYIRN; -.
DR OrthoDB; 32262at2; -.
DR Proteomes; UP000000435; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004832; F:valine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006438; P:valyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd07962; Anticodon_Ia_Val; 1.
DR Gene3D; 3.40.50.620; -; 2.
DR HAMAP; MF_02005; Val_tRNA_synth_type2; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033705; Anticodon_Ia_Val.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR022874; Valine-tRNA_ligase_type_2.
DR InterPro; IPR002303; Valyl-tRNA_ligase.
DR PANTHER; PTHR11946; PTHR11946; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 1.
DR PRINTS; PR00986; TRNASYNTHVAL.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
DR TIGRFAMs; TIGR00422; valS; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..802
FT /note="Valine--tRNA ligase"
FT /id="PRO_0000224608"
FT MOTIF 45..55
FT /note="'HIGH' region"
FT MOTIF 524..528
FT /note="'KMSKS' region"
FT BINDING 527
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02005"
SQ SEQUENCE 802 AA; 93049 MW; 4B1A79DFF931A674 CRC64;
MQSIFNNKYQ FKNIETKYNT LWDTTKLYKW KNSGTNQFVI DTPPPTISGQ LHIGHVFSYC
HTDFIARYQR MLGKDVFYPI GFDDNGLPTE RLVEKTKKIR ATDISRKEFK TICTQVSHEF
RIQFKQLFQS IGISYDWDLE YHTISKDIQK ISQTSFINLY NKGKLYRKLQ PIFWDCIDKT
AIARAEVEEN ELSSFMNTIA FSTEAGKAIN IATTRPELMP ACVAVFFNPS DIRYQDLLGQ
NAIVPIFGNK VKILSDDQVK IDKGTGLVMC CTFGDEMDVY WWNKHNLDTK IIISKSGTID
HLNTLQGQDV CKQLHGLSIT EARALIIEIL ERNNLLIQKQ EITHNVKCAE RSGAPIEILL
SHQWFIKVVD IKHELLKQVQ KINWHPQSMR KQIEIWIEGL NWDWCISRQR YFGVPFPVWY
SKDGKIILPD INKLPIDPTN DLPEGYQDTE IEVETDVMDT WATSSLSTQF HNISATPADL
RAQSHEIIRS WAFYTILQAY YHNNDIPWKN IMISGWCLAE DKTKMSKSKG NVLTPNKLLD
EYGADVVRYW TANSKLGADT TFSNEILKLG KRFTTKLWNA SKFVSMFIDQ YSEPDLQYIT
ETMDKWILSK LYKVIVKATE SFNSFEYCIA LDCIESFFWK DFCDNYLELS KKRAYGELIS
KQEHLSAVNT LSFVLRELLK MLAPFMPYVT EEIYRTLYSS NNSIHSHNTW PAADVNLYNE
SDELLGETFI EILNQVRKVK ASAQLSVKYK INKLIINKHF PVSLENDLKA VCNADCIVYD
NRQNDNKEQL LVSVEFENVQ IT