SYV_FRATT
ID SYV_FRATT Reviewed; 919 AA.
AC Q5NHZ4;
DT 07-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-2005, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004};
DE EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};
DE AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004};
DE Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};
GN Name=valS {ECO:0000255|HAMAP-Rule:MF_02004}; OrderedLocusNames=FTT_0299;
OS Francisella tularensis subsp. tularensis (strain SCHU S4 / Schu 4).
OC Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
OC Francisellaceae; Francisella.
OX NCBI_TaxID=177416;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SCHU S4 / Schu 4;
RX PubMed=15640799; DOI=10.1038/ng1499;
RA Larsson P., Oyston P.C.F., Chain P., Chu M.C., Duffield M., Fuxelius H.-H.,
RA Garcia E., Haelltorp G., Johansson D., Isherwood K.E., Karp P.D.,
RA Larsson E., Liu Y., Michell S., Prior J., Prior R., Malfatti S.,
RA Sjoestedt A., Svensson K., Thompson N., Vergez L., Wagg J.K., Wren B.W.,
RA Lindler L.E., Andersson S.G.E., Forsman M., Titball R.W.;
RT "The complete genome sequence of Francisella tularensis, the causative
RT agent of tularemia.";
RL Nat. Genet. 37:153-159(2005).
CC -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC inadvertently accommodate and process structurally similar amino acids
CC such as threonine, to avoid such errors, it has a 'posttransfer'
CC editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC dependent manner. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_02004};
CC -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC one for editing. The misactivated threonine is translocated from the
CC active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- DOMAIN: The C-terminal coiled-coil domain is crucial for aminoacylation
CC activity. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC ValS type 1 subfamily. {ECO:0000255|HAMAP-Rule:MF_02004}.
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DR EMBL; AJ749949; CAG44932.1; -; Genomic_DNA.
DR RefSeq; WP_003021639.1; NZ_CP010290.1.
DR RefSeq; YP_169348.1; NC_006570.2.
DR AlphaFoldDB; Q5NHZ4; -.
DR SMR; Q5NHZ4; -.
DR IntAct; Q5NHZ4; 6.
DR STRING; 177416.FTT_0299; -.
DR DNASU; 3191933; -.
DR EnsemblBacteria; CAG44932; CAG44932; FTT_0299.
DR KEGG; ftu:FTT_0299; -.
DR eggNOG; COG0525; Bacteria.
DR OMA; FATKLWN; -.
DR Proteomes; UP000001174; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004832; F:valine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006438; P:valyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd07962; Anticodon_Ia_Val; 1.
DR Gene3D; 1.10.287.380; -; 1.
DR Gene3D; 3.40.50.620; -; 2.
DR Gene3D; 3.90.740.10; -; 1.
DR HAMAP; MF_02004; Val_tRNA_synth_type1; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033705; Anticodon_Ia_Val.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR010978; tRNA-bd_arm.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR037118; Val-tRNA_synth_C_sf.
DR InterPro; IPR019499; Val-tRNA_synth_tRNA-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR002303; Valyl-tRNA_ligase.
DR PANTHER; PTHR11946; PTHR11946; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 1.
DR Pfam; PF10458; Val_tRNA-synt_C; 1.
DR PRINTS; PR00986; TRNASYNTHVAL.
DR SUPFAM; SSF46589; SSF46589; 1.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
DR TIGRFAMs; TIGR00422; valS; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Coiled coil; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..919
FT /note="Valine--tRNA ligase"
FT /id="PRO_0000224479"
FT COILED 849..919
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
FT MOTIF 46..56
FT /note="'HIGH' region"
FT MOTIF 528..532
FT /note="'KMSKS' region"
FT BINDING 531
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
SQ SEQUENCE 919 AA; 104790 MW; 365042C72423CA40 CRC64;
MTQEINKNYN PKEIEQANYQ NWEASGKFAC GNTDSKDTYT IMLPPPNVTG TLHMGHGFQM
SLMDILIRYN RMSGKDTLWQ PGTDHAGIAT QMVVERQLNA QGISRHDLGR ENFVSKVWEW
KELSGGTITS QMRRIGASPD WDRERFTMDK GLSDAVKKCF IKLYEDGLAY RGERLVNWDP
KLKTAVSDLE VAQVDKQGSL WHFIYPVADS DEKIIIATTR PETMLGDMAV AVHPEDERYT
HLVGKMINLP LTDRQIPIIA DDYVEKDFGT GCVKITPAHD FNDYEMGKRH NLPMLNILTD
DATLNTNVPS KYQGLDRFEA RKQVVADMEA LGLLDKIEPH ALKVPTGDRT GEILEPYLTK
QWFVKADVLA KPAIEAVEKG DVRFVPDNWK NTYFAWMRDI QDWCVSRQLW WGHRIPAWYD
EAGNAYVGED EADVRAKYNL ADDIAIKQDE DVFDTWFSSA LWPFSTLGWP EQTPELAKYY
PTSVLVTGFD IIFFWVARMM MFGMYFMNDV PFRDIYITGL IRDSEGQKMS KSKGNVLDPV
DLIDGISLDE LLKKRTTGLM QPQMKAKIEK ATKKEFPEGI SAYGADAVRF TYAALASTSR
DISFDTARVE GYRNFCNKLW NASRFVMMNL DDYKVCDNYE LGVADKWIWS VLNTATADVH
RHLANYRFDL VTNTIYDLVW NNYCDWYVEF AKVALKDDSL SEQQKNGVKY TLTKVLENIL
ALAHPLIPFI TESIYQQLKA HLNDAKDTIM DVSYPVATQA LEAPEAEKAI VWLQNVVTTL
RNMRSEVGIK PSLEISLIVK DVADKDREYL AQTEGFIKAL ARINNIEFND NPPTSLSQIV
EGLELNIPLA GLVDIEAEKA RLDKELDKLK DEVDRVQKKL SNERFVSNAP EAVVAAEQEK
LAKYQELYAK TLEKKEALG