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SYV_NITEU
ID   SYV_NITEU               Reviewed;         918 AA.
AC   Q82X51;
DT   07-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT   01-JUN-2003, sequence version 1.
DT   03-AUG-2022, entry version 106.
DE   RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004};
DE            EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};
DE   AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004};
DE            Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};
GN   Name=valS {ECO:0000255|HAMAP-Rule:MF_02004}; OrderedLocusNames=NE0444;
OS   Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC
OS   14298).
OC   Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales;
OC   Nitrosomonadaceae; Nitrosomonas.
OX   NCBI_TaxID=228410;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298;
RX   PubMed=12700255; DOI=10.1128/jb.185.9.2759-2773.2003;
RA   Chain P., Lamerdin J.E., Larimer F.W., Regala W., Lao V., Land M.L.,
RA   Hauser L., Hooper A.B., Klotz M.G., Norton J., Sayavedra-Soto L.A.,
RA   Arciero D.M., Hommes N.G., Whittaker M.M., Arp D.J.;
RT   "Complete genome sequence of the ammonia-oxidizing bacterium and obligate
RT   chemolithoautotroph Nitrosomonas europaea.";
RL   J. Bacteriol. 185:2759-2773(2003).
CC   -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC       inadvertently accommodate and process structurally similar amino acids
CC       such as threonine, to avoid such errors, it has a 'posttransfer'
CC       editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC       dependent manner. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC         tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC         COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC         ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_02004};
CC   -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC       one for editing. The misactivated threonine is translocated from the
CC       active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- DOMAIN: The C-terminal coiled-coil domain is crucial for aminoacylation
CC       activity. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC       ValS type 1 subfamily. {ECO:0000255|HAMAP-Rule:MF_02004}.
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DR   EMBL; AL954747; CAD84355.1; -; Genomic_DNA.
DR   RefSeq; WP_011111079.1; NC_004757.1.
DR   AlphaFoldDB; Q82X51; -.
DR   SMR; Q82X51; -.
DR   STRING; 228410.NE0444; -.
DR   EnsemblBacteria; CAD84355; CAD84355; NE0444.
DR   KEGG; neu:NE0444; -.
DR   eggNOG; COG0525; Bacteria.
DR   HOGENOM; CLU_001493_0_2_4; -.
DR   OMA; FATKLWN; -.
DR   OrthoDB; 32262at2; -.
DR   PhylomeDB; Q82X51; -.
DR   Proteomes; UP000001416; Chromosome.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR   GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0004832; F:valine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR   GO; GO:0006438; P:valyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR   CDD; cd07962; Anticodon_Ia_Val; 1.
DR   Gene3D; 1.10.287.380; -; 1.
DR   Gene3D; 3.40.50.620; -; 2.
DR   Gene3D; 3.90.740.10; -; 1.
DR   HAMAP; MF_02004; Val_tRNA_synth_type1; 1.
DR   InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR   InterPro; IPR002300; aa-tRNA-synth_Ia.
DR   InterPro; IPR033705; Anticodon_Ia_Val.
DR   InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR   InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR   InterPro; IPR010978; tRNA-bd_arm.
DR   InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR   InterPro; IPR037118; Val-tRNA_synth_C_sf.
DR   InterPro; IPR019499; Val-tRNA_synth_tRNA-bd.
DR   InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR   InterPro; IPR002303; Valyl-tRNA_ligase.
DR   PANTHER; PTHR11946; PTHR11946; 1.
DR   Pfam; PF08264; Anticodon_1; 1.
DR   Pfam; PF00133; tRNA-synt_1; 1.
DR   Pfam; PF10458; Val_tRNA-synt_C; 1.
DR   PRINTS; PR00986; TRNASYNTHVAL.
DR   SUPFAM; SSF46589; SSF46589; 1.
DR   SUPFAM; SSF47323; SSF47323; 1.
DR   SUPFAM; SSF50677; SSF50677; 1.
DR   TIGRFAMs; TIGR00422; valS; 1.
DR   PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE   3: Inferred from homology;
KW   Aminoacyl-tRNA synthetase; ATP-binding; Coiled coil; Cytoplasm; Ligase;
KW   Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT   CHAIN           1..918
FT                   /note="Valine--tRNA ligase"
FT                   /id="PRO_0000224519"
FT   COILED          851..918
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
FT   MOTIF           44..54
FT                   /note="'HIGH' region"
FT   MOTIF           528..532
FT                   /note="'KMSKS' region"
FT   BINDING         531
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
SQ   SEQUENCE   918 AA;  104941 MW;  117721D9D0F27425 CRC64;
     MELAKSFDPK EIETRWYSTW ETAGYFSPTD HKGADPYCIM LPPPNVTGTL HMGHAFQHTL
     MDALIRYHRM LGDNTLWQPG TDHAGIATQI VVERQLDQEG KDRRQMGREA FLERVWQWKE
     ESGSTITRQM RRMGASCDWS RERFTMDETL SRAVTEVFVR LYREGLIYRG KRLVNWDPVL
     QTAVSDLEVV SVEEQGSLWH ILYPFEQLEG GSEHQGLVVA TTRPETMLGD MAVAVHPEDE
     RYRHLIGRHL RLPLSERTIP IIADSYVDPA FGTGCVKITP AHDFNDYQVG LRHKLIPLNV
     FTLDGKINDN APAEFQGLDR FDARKKVIAD LQAQGLLVET RPHKLMVPRG DRTNTVIEPM
     LTDQWYLAME GLAKQGLAVV ASGKVRFVPE NWTHVYNQWL ENIQDWCISR QLWWGHRIPA
     WYDEDGNVTV AHDLEEARKL SGKEILRQDD DVLDTWFSSA LWPFSTLGWP EQTPELKTFL
     PGSVLVTGFD IIFFWVARMV MMSLHFTGEV PFREVYITGL IRDAEGQKMS KSKGNVLDPL
     DLIDGVSLTE LIRKRTTGLM NPKQAESIEK TTRKQFPQGI PAFGTDALRF TFASLASHGR
     DIKFDLQRCE GYRNFCNKLW NATRFVLMNC EGKDTGLDET LPLNFSQADK WIVGRLQQAE
     QGVVQAFDEY RFDLAAREMY EFVWDEYCDW YVELAKVQLS SADEAHQRAT RRTLVRVLEA
     ALRLAHPIIP FITEELWQAV APLAGKTGTS IMHQPYPQAD PARMDEHAAA NVQLLKEIVN
     ACRTLRGEMK LSPAERVPLL IEGDPSRLAD FSPYLLALAK LSEVTILPDR LPDTDAPVAI
     TGEFRLMLKI EVDVAAERER LNKEMQRLTL EIGKARTKLD NPDFLQRAPE KVVLQEKERL
     ATFSATLEKL DQQLHKLG
 
 
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