SYV_SALTO
ID SYV_SALTO Reviewed; 860 AA.
AC A4X0V0;
DT 20-MAY-2008, integrated into UniProtKB/Swiss-Prot.
DT 29-MAY-2007, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02005};
DE EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02005};
DE AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02005};
DE Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02005};
GN Name=valS {ECO:0000255|HAMAP-Rule:MF_02005}; OrderedLocusNames=Strop_0015;
OS Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440).
OC Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae;
OC Salinispora.
OX NCBI_TaxID=369723;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC BAA-916 / DSM 44818 / CNB-440;
RX PubMed=17563368; DOI=10.1073/pnas.0700962104;
RA Udwary D.W., Zeigler L., Asolkar R.N., Singan V., Lapidus A., Fenical W.,
RA Jensen P.R., Moore B.S.;
RT "Genome sequencing reveals complex secondary metabolome in the marine
RT actinomycete Salinispora tropica.";
RL Proc. Natl. Acad. Sci. U.S.A. 104:10376-10381(2007).
CC -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC inadvertently accommodate and process structurally similar amino acids
CC such as threonine, to avoid such errors, it has a 'posttransfer'
CC editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC dependent manner. {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_02005};
CC -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC one for editing. The misactivated threonine is translocated from the
CC active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC ValS type 2 subfamily. {ECO:0000255|HAMAP-Rule:MF_02005}.
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DR EMBL; CP000667; ABP52500.1; -; Genomic_DNA.
DR RefSeq; WP_011903937.1; NC_009380.1.
DR AlphaFoldDB; A4X0V0; -.
DR SMR; A4X0V0; -.
DR STRING; 369723.Strop_0015; -.
DR EnsemblBacteria; ABP52500; ABP52500; Strop_0015.
DR KEGG; stp:Strop_0015; -.
DR PATRIC; fig|369723.5.peg.15; -.
DR eggNOG; COG0525; Bacteria.
DR HOGENOM; CLU_001493_0_2_11; -.
DR OMA; RQWYIRN; -.
DR Proteomes; UP000000235; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004832; F:valine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006438; P:valyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd07962; Anticodon_Ia_Val; 1.
DR Gene3D; 3.40.50.620; -; 2.
DR Gene3D; 3.90.740.10; -; 1.
DR HAMAP; MF_02005; Val_tRNA_synth_type2; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033705; Anticodon_Ia_Val.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR022874; Valine-tRNA_ligase_type_2.
DR InterPro; IPR002303; Valyl-tRNA_ligase.
DR PANTHER; PTHR11946; PTHR11946; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 1.
DR PRINTS; PR00986; TRNASYNTHVAL.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..860
FT /note="Valine--tRNA ligase"
FT /id="PRO_1000088571"
FT REGION 469..491
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 43..53
FT /note="'HIGH' region"
FT MOTIF 574..578
FT /note="'KMSKS' region"
FT BINDING 577
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02005"
SQ SEQUENCE 860 AA; 95775 MW; B83612E2219E8A90 CRC64;
MPAKASLEGI EKVWSRVWEQ NGTYRFDRSV TRSEVYSVDT PPPTVSGALH VGHVFSYTHS
DAIARFQRMR GRAVFYPMGW DDNGLPTERR VQNYYGVRCD PSLPYDPGYT PPAEPPSRPQ
PISRRNFVEL CRNLTELDEQ AFEALWRHLG LSVDWSLTYA TIDDRSRAIS QRAFLRNLAR
GEAYLADAPT LWDVTFRTAV AQAELEDRER QGTYYRLAFH SATGDKIYVE TTRPELLPAC
VALVAHPDDE RYQHLLGSTA VSPLFGVPVP IRAHPLAQPD KGSGIAMICT FGDLTDVLWW
RELALPTRPV MGRDGRLLPE PPPGIVNADA VAAYQTLAGL TAFSAKAKVV ELLRAAGDLE
IAPRPTTQTV KFYEKGDKPL EIITTRQWYV RNGGRDTELR SALVHRGREL TWSPEFMRSR
YENWVEGLSG DWVISRQRFF GVPIPVWYPL DDSGEPDYAH PILPDDVALP VDPSSDAPTG
YQESQRNQPG GFMADPDVMD TWATSSLTPE IAGGWTVDDD LFARVFPMDL RPQAHEIIRT
WLFATVLRSH QEFNCLPWTT VLLSGWILDP DRKKMSKSKG NTVTPMALLE KYGSDAVRYW
AVSGRPGTDT AFDTGQMKIG RRLAIKILNA TTFVLRFGSP TLLAPHMAHV TEPLDRSMLA
RLASVVDSAT TGFTQHDYTR SLECTEQFFW SFCDDYLELV KERAYGEPDD RAVRSAHAAL
ALALHTLLRL FAPMLPFVTE EAWSWWQEGS VHRAAWPTGQ ELVGPDVSAE ANRSTEASGS
GEAGTDLLGL ASDVLAAIRR AKSEAKQSMR APVAQLTLRG RASDLAAFAL VSRDVRAAGV
VREVDTAEAD TPLTPEITLG