SYV_SCHPO
ID SYV_SCHPO Reviewed; 980 AA.
AC O75005;
DT 11-JAN-2001, integrated into UniProtKB/Swiss-Prot.
DT 01-NOV-1998, sequence version 1.
DT 03-AUG-2022, entry version 149.
DE RecName: Full=Valine--tRNA ligase;
DE EC=6.1.1.9;
DE AltName: Full=Valyl-tRNA synthetase;
DE Short=ValRS;
GN Name=vas2; ORFNames=SPBC1709.02c, SPBC1734.18c;
OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina;
OC Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae;
OC Schizosaccharomyces.
OX NCBI_TaxID=284812;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=972 / ATCC 24843;
RX PubMed=11859360; DOI=10.1038/nature724;
RA Wood V., Gwilliam R., Rajandream M.A., Lyne M.H., Lyne R., Stewart A.,
RA Sgouros J.G., Peat N., Hayles J., Baker S.G., Basham D., Bowman S.,
RA Brooks K., Brown D., Brown S., Chillingworth T., Churcher C.M., Collins M.,
RA Connor R., Cronin A., Davis P., Feltwell T., Fraser A., Gentles S.,
RA Goble A., Hamlin N., Harris D.E., Hidalgo J., Hodgson G., Holroyd S.,
RA Hornsby T., Howarth S., Huckle E.J., Hunt S., Jagels K., James K.D.,
RA Jones L., Jones M., Leather S., McDonald S., McLean J., Mooney P.,
RA Moule S., Mungall K.L., Murphy L.D., Niblett D., Odell C., Oliver K.,
RA O'Neil S., Pearson D., Quail M.A., Rabbinowitsch E., Rutherford K.M.,
RA Rutter S., Saunders D., Seeger K., Sharp S., Skelton J., Simmonds M.N.,
RA Squares R., Squares S., Stevens K., Taylor K., Taylor R.G., Tivey A.,
RA Walsh S.V., Warren T., Whitehead S., Woodward J.R., Volckaert G., Aert R.,
RA Robben J., Grymonprez B., Weltjens I., Vanstreels E., Rieger M.,
RA Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Duesterhoeft A.,
RA Fritzc C., Holzer E., Moestl D., Hilbert H., Borzym K., Langer I., Beck A.,
RA Lehrach H., Reinhardt R., Pohl T.M., Eger P., Zimmermann W., Wedler H.,
RA Wambutt R., Purnelle B., Goffeau A., Cadieu E., Dreano S., Gloux S.,
RA Lelaure V., Mottier S., Galibert F., Aves S.J., Xiang Z., Hunt C.,
RA Moore K., Hurst S.M., Lucas M., Rochet M., Gaillardin C., Tallada V.A.,
RA Garzon A., Thode G., Daga R.R., Cruzado L., Jimenez J., Sanchez M.,
RA del Rey F., Benito J., Dominguez A., Revuelta J.L., Moreno S.,
RA Armstrong J., Forsburg S.L., Cerutti L., Lowe T., McCombie W.R.,
RA Paulsen I., Potashkin J., Shpakovski G.V., Ussery D., Barrell B.G.,
RA Nurse P.;
RT "The genome sequence of Schizosaccharomyces pombe.";
RL Nature 415:871-880(2002).
RN [2]
RP SUBCELLULAR LOCATION [LARGE SCALE ANALYSIS].
RX PubMed=16823372; DOI=10.1038/nbt1222;
RA Matsuyama A., Arai R., Yashiroda Y., Shirai A., Kamata A., Sekido S.,
RA Kobayashi Y., Hashimoto A., Hamamoto M., Hiraoka Y., Horinouchi S.,
RA Yoshida M.;
RT "ORFeome cloning and global analysis of protein localization in the fission
RT yeast Schizosaccharomyces pombe.";
RL Nat. Biotechnol. 24:841-847(2006).
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000269|PubMed:16823372}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC {ECO:0000305}.
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DR EMBL; CU329671; CAA21312.1; -; Genomic_DNA.
DR PIR; T39630; T39630.
DR RefSeq; NP_595435.1; NM_001021343.2.
DR AlphaFoldDB; O75005; -.
DR SMR; O75005; -.
DR BioGRID; 276730; 4.
DR STRING; 4896.SPBC1709.02c.1; -.
DR iPTMnet; O75005; -.
DR MaxQB; O75005; -.
DR PaxDb; O75005; -.
DR PRIDE; O75005; -.
DR EnsemblFungi; SPBC1709.02c.1; SPBC1709.02c.1:pep; SPBC1709.02c.
DR GeneID; 2540197; -.
DR KEGG; spo:SPBC1709.02c; -.
DR PomBase; SPBC1709.02c; -.
DR VEuPathDB; FungiDB:SPBC1709.02c; -.
DR eggNOG; KOG0432; Eukaryota.
DR HOGENOM; CLU_001493_0_1_1; -.
DR InParanoid; O75005; -.
DR OMA; FATKLWN; -.
DR PhylomeDB; O75005; -.
DR BRENDA; 6.1.1.9; 5613.
DR PRO; PR:O75005; -.
DR Proteomes; UP000002485; Chromosome II.
DR GO; GO:0005737; C:cytoplasm; IGI:PomBase.
DR GO; GO:0005829; C:cytosol; HDA:PomBase.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; ISM:PomBase.
DR GO; GO:0004832; F:valine-tRNA ligase activity; IDA:PomBase.
DR GO; GO:0002181; P:cytoplasmic translation; NAS:PomBase.
DR GO; GO:0061475; P:cytosolic valyl-tRNA aminoacylation; EXP:PomBase.
DR GO; GO:0006438; P:valyl-tRNA aminoacylation; IBA:GO_Central.
DR CDD; cd07962; Anticodon_Ia_Val; 1.
DR Gene3D; 3.40.50.620; -; 2.
DR Gene3D; 3.90.740.10; -; 1.
DR HAMAP; MF_02004; Val_tRNA_synth_type1; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033705; Anticodon_Ia_Val.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR002303; Valyl-tRNA_ligase.
DR PANTHER; PTHR11946; PTHR11946; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 1.
DR PRINTS; PR00986; TRNASYNTHVAL.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
DR TIGRFAMs; TIGR00422; valS; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..980
FT /note="Valine--tRNA ligase"
FT /id="PRO_0000035838"
FT REGION 1..40
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 139..149
FT /note="'HIGH' region"
FT MOTIF 652..656
FT /note="'KMSKS' region"
FT COMPBIAS 22..40
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT BINDING 655
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000250"
SQ SEQUENCE 980 AA; 111317 MW; BB91FAF976030C3C CRC64;
MADKGCEAAQ SKDSSAPGSG EPRPKTEKEL ERERQKAAKL EKYHAKLAAK KAKEEARKPK
LDKKAKIASP VAEYVEKTTP GEKKVLQDLD SPALKSYNPK AVESAWYDWW VKSGFFEPEF
GPDGKPKKEG VFVITSPPPN VTGALHIGHA LTIAIQDSLA RWNRMLGKTV LFLGGFDHAG
LSTQSVVEKK LWYTQKKTRH DYPRDKFVDI VWEWKEEYHN RIKNQMSRLG GSFDWTREAF
TMDENLSRAV VETFVRLHEE NIIYRANRLV NWCTALQTTL SNLEVENVDV PGRTLLKVPG
YDEPVEVGVL TSIAYAVEGS DERIVIATTR PETLLGDTAV AVHPQDPRYK HLHGKFVKHP
FCNRSIPIIC DDIIVDMEFG TGAVKITPAH DPNDYEVGKR HNLEFINIFT DDGLLNENCG
EFAGMKRFTA RVKVVERLKE LGLFVGTKEN PMVIPLCGKT SDIIEPVMKP QWWVNQKEMA
AAAAEVVKSG EIEIAPDMSR REFIRWMENI QDWCISRQLW WGHRIPAYFV NLADEPSQDR
SEGRYWVTGR TLEQAEEKAK AAFPGKSFTL EQDEDVLDTW FSSGLWPFST LGWPKDTSDY
ENFYPTTLME TGWDILFFWI ARMVMLGLKL TGKIPFKRVF CHALVRDAQG RKMSKSLGNV
VDPIDVIEGI SLQALHDKLL VGNLDSREVE KAKKGQRLSY PKGIPQCGTD ALRFTLCSLT
TGGRDLNLDI LRVEGYRKFC NKLYNATKFA LGRLGSNFVP NKTADLTGNE SLVEKWIFHR
LNIAAAAMNK NMEEMNFLQA TSAVHQFWLY ELCDVYIENS KYLLSDGTEV QQESAKQTLY
TVLDNALRLM HPFMPYVTEE MWQRLPRRPG DKTQTIVKAA FPVERVDYSN EIAAKYYESI
ITVVHSTRSM MAENGIKSDA VVYIHPDEEH SKLITSESAS IQSLIKKCKT LSIVDNTFDS
DKCVKNEVLE GSTIFLERNN