SYV_SPHEL
ID SYV_SPHEL Reviewed; 811 AA.
AC Q7X2N3;
DT 07-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2003, sequence version 1.
DT 03-AUG-2022, entry version 77.
DE RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004};
DE EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};
DE AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004};
DE Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};
GN Name=valS {ECO:0000255|HAMAP-Rule:MF_02004};
OS Sphingomonas elodea.
OC Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingomonas.
OX NCBI_TaxID=179878;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RC STRAIN=ATCC 31461 / PS-60;
RX PubMed=14767675; DOI=10.1007/s10295-004-0118-9;
RA Harding N.E., Patel Y.N., Coleman R.J.;
RT "Organization of genes required for gellan polysaccharide biosynthesis in
RT Sphingomonas elodea ATCC 31461.";
RL J. Ind. Microbiol. Biotechnol. 31:70-82(2004).
CC -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC inadvertently accommodate and process structurally similar amino acids
CC such as threonine, to avoid such errors, it has a 'posttransfer'
CC editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC dependent manner. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_02004};
CC -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC one for editing. The misactivated threonine is translocated from the
CC active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC ValS type 1 subfamily. {ECO:0000255|HAMAP-Rule:MF_02004}.
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DR EMBL; AY220100; AAP46185.1; -; Genomic_DNA.
DR STRING; 1081640.AGFU01000061_gene244; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004832; F:valine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006438; P:valyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd07962; Anticodon_Ia_Val; 1.
DR Gene3D; 3.40.50.620; -; 2.
DR Gene3D; 3.90.740.10; -; 1.
DR HAMAP; MF_02004; Val_tRNA_synth_type1; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033705; Anticodon_Ia_Val.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR002303; Valyl-tRNA_ligase.
DR PANTHER; PTHR11946; PTHR11946; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 1.
DR PRINTS; PR00986; TRNASYNTHVAL.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
DR TIGRFAMs; TIGR00422; valS; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..811
FT /note="Valine--tRNA ligase"
FT /id="PRO_0000224559"
FT MOTIF 44..54
FT /note="'HIGH' region"
FT MOTIF 542..546
FT /note="'KMSKS' region"
FT BINDING 545
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
SQ SEQUENCE 811 AA; 90775 MW; D5E32C2901DC2F4A CRC64;
MTELPKTFDP AEIESRWYAH WEDEGLFRPE RTGAEPWTIV NPPPNVTGSL HIGHALDNTL
QDILVRHARL KGKDARWVVG TDHAGIATQM VVERQLNAAG SKRTDFTREA FVDKVWEWKA
ESGGQITRQL RRLGCSMDWA NERFTMDEGF SKAVLKVFVE LYRQGLVYRD KRLVNWDPGL
GTAISDLEVE TKEVRGNFWH LRYPLADGSG YIQVATTRPE TMLADMAVAV HPEDERYKAL
IGKQVRLPIT DRLIPIVGDE HADPELGSGA VKITPGHDFN DFEVGVRAGI KAGEMLNMLD
AKAAICQTQD GLVPAELIGL DRFEARKVIV ARLKDEGFLV PWTDKEGAEH DAEPRTIQTP
YGDRSGQVIE PWLTDQWYVD AATLAKPAIE AVRSGATKIV PKSWEKTYFN WMENIQPWCV
SRQLWWGHRI PAWFDAEGKP YVAETEEEAQ AEAGEGVALT RDPDVLDTWF SSALWPFATL
GWPENSDPTL GGRYSNDVLI SGFDILFFWD ARMMMQGLHF MKEVPFKTLY LHGLVRAADG
QKMSKSKGNT VDPLGMIDKY GADALRFFMA AMESQGRDIK MDEKRLEGYR NFATKLWNAA
RFCQANGIAA SKSLEAPTAE LAVNRWIIAE TIATVXALDL ALADLRFDEA ANCIYQFVWS
RFCDWYLELI KPVLQGEGVA AAQAEETRAV AGWALDQILV MLHPFMPFIT EELWSKMGPR
EHDLIVAKWP MADARALDPS AAQEIDWLIR LVSEIRAART ELNVPPGARL PLHVRDASAE
TAXRLIGQEA ALARLGRVDQ AQGDAPAGGG A