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SYV_STRR6
ID   SYV_STRR6               Reviewed;         883 AA.
AC   Q8DQU7;
DT   07-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT   01-MAR-2003, sequence version 1.
DT   03-AUG-2022, entry version 110.
DE   RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004};
DE            EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};
DE   AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004};
DE            Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};
GN   Name=valS {ECO:0000255|HAMAP-Rule:MF_02004}; OrderedLocusNames=spr0492;
OS   Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
OC   Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae;
OC   Streptococcus.
OX   NCBI_TaxID=171101;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC BAA-255 / R6;
RX   PubMed=11544234; DOI=10.1128/jb.183.19.5709-5717.2001;
RA   Hoskins J., Alborn W.E. Jr., Arnold J., Blaszczak L.C., Burgett S.,
RA   DeHoff B.S., Estrem S.T., Fritz L., Fu D.-J., Fuller W., Geringer C.,
RA   Gilmour R., Glass J.S., Khoja H., Kraft A.R., Lagace R.E., LeBlanc D.J.,
RA   Lee L.N., Lefkowitz E.J., Lu J., Matsushima P., McAhren S.M., McHenney M.,
RA   McLeaster K., Mundy C.W., Nicas T.I., Norris F.H., O'Gara M., Peery R.B.,
RA   Robertson G.T., Rockey P., Sun P.-M., Winkler M.E., Yang Y.,
RA   Young-Bellido M., Zhao G., Zook C.A., Baltz R.H., Jaskunas S.R.,
RA   Rosteck P.R. Jr., Skatrud P.L., Glass J.I.;
RT   "Genome of the bacterium Streptococcus pneumoniae strain R6.";
RL   J. Bacteriol. 183:5709-5717(2001).
CC   -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC       inadvertently accommodate and process structurally similar amino acids
CC       such as threonine, to avoid such errors, it has a 'posttransfer'
CC       editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC       dependent manner. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- CATALYTIC ACTIVITY:
CC       Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC         tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC         COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC         ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC         Evidence={ECO:0000255|HAMAP-Rule:MF_02004};
CC   -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC       one for editing. The misactivated threonine is translocated from the
CC       active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- DOMAIN: The C-terminal coiled-coil domain is crucial for aminoacylation
CC       activity. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC   -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC       ValS type 1 subfamily. {ECO:0000255|HAMAP-Rule:MF_02004}.
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DR   EMBL; AE007317; AAK99296.1; -; Genomic_DNA.
DR   PIR; D97933; D97933.
DR   RefSeq; NP_358086.1; NC_003098.1.
DR   RefSeq; WP_000032218.1; NC_003098.1.
DR   AlphaFoldDB; Q8DQU7; -.
DR   SMR; Q8DQU7; -.
DR   STRING; 171101.spr0492; -.
DR   EnsemblBacteria; AAK99296; AAK99296; spr0492.
DR   GeneID; 60234131; -.
DR   KEGG; spr:spr0492; -.
DR   PATRIC; fig|171101.6.peg.542; -.
DR   eggNOG; COG0525; Bacteria.
DR   HOGENOM; CLU_001493_0_2_9; -.
DR   OMA; FATKLWN; -.
DR   Proteomes; UP000000586; Chromosome.
DR   GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR   GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR   GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR   GO; GO:0004832; F:valine-tRNA ligase activity; IBA:GO_Central.
DR   GO; GO:0006438; P:valyl-tRNA aminoacylation; IBA:GO_Central.
DR   CDD; cd07962; Anticodon_Ia_Val; 1.
DR   Gene3D; 1.10.287.380; -; 1.
DR   Gene3D; 3.40.50.620; -; 2.
DR   Gene3D; 3.90.740.10; -; 1.
DR   HAMAP; MF_02004; Val_tRNA_synth_type1; 1.
DR   InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR   InterPro; IPR002300; aa-tRNA-synth_Ia.
DR   InterPro; IPR033705; Anticodon_Ia_Val.
DR   InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR   InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR   InterPro; IPR010978; tRNA-bd_arm.
DR   InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR   InterPro; IPR037118; Val-tRNA_synth_C_sf.
DR   InterPro; IPR019499; Val-tRNA_synth_tRNA-bd.
DR   InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR   InterPro; IPR002303; Valyl-tRNA_ligase.
DR   PANTHER; PTHR11946; PTHR11946; 1.
DR   Pfam; PF08264; Anticodon_1; 1.
DR   Pfam; PF00133; tRNA-synt_1; 2.
DR   Pfam; PF10458; Val_tRNA-synt_C; 1.
DR   PRINTS; PR00986; TRNASYNTHVAL.
DR   SUPFAM; SSF46589; SSF46589; 1.
DR   SUPFAM; SSF47323; SSF47323; 1.
DR   SUPFAM; SSF50677; SSF50677; 1.
DR   TIGRFAMs; TIGR00422; valS; 1.
DR   PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE   3: Inferred from homology;
KW   Aminoacyl-tRNA synthetase; ATP-binding; Coiled coil; Cytoplasm; Ligase;
KW   Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT   CHAIN           1..883
FT                   /note="Valine--tRNA ligase"
FT                   /id="PRO_0000224575"
FT   COILED          809..844
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
FT   MOTIF           46..56
FT                   /note="'HIGH' region"
FT   MOTIF           520..524
FT                   /note="'KMSKS' region"
FT   BINDING         523
FT                   /ligand="ATP"
FT                   /ligand_id="ChEBI:CHEBI:30616"
FT                   /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
SQ   SEQUENCE   883 AA;  100857 MW;  79FFA6E836F4F0C9 CRC64;
     MSKELSSKYN PAEVEAGRYQ KWLDADVFKP SGDQKAKPYS IVIPPPNVTG KLHLGHAWDT
     TLQDIIIRQK RMQGFDTLWL PGMDHAGIAT QAKVEERLRG EGISRYDLGR ESFLTKVWEW
     KDEYATTIKE QWGKMGLSVD YSRERFTLDE GLSKAVRKVF VDLYKKGWIY RGEFIINWDP
     AARTALSDIE VIHKDVEGAF YHMNYMLEDG SRALEVATTR PETMFGDVAI AVNPEDPRYK
     DLIGKNVILP IANKLIPIVG DEHADPEFGT GVVKITPAHD PNDFLVGQRH NLPQVNIMND
     DGTMNELVFE FSGMDRFEAR KAVVAKLEEI GALVKIEKRV HSVGHSERTG VVVEPRLSTQ
     WFVKMDQLAK NAIANQDTED KVEFYPPRFN DTFLQWMENV HDWVISRQLW WGHQIPAWYN
     ADGEMYVGEE APEGDGWTQD EDVLDTWFSS ALWPFSTMGW PEVDSEDFKR YFPTSTLVTG
     YDIIFFWVSR MIFQSLEFTG RQPFQNVLIH GLIRDEQGRK MSKSLGNGID PMDVIEKYGA
     DALRWFLSNG SAPGQDVRFS YEKMDASWNF INKIWNISRY ILMNNGGLTL DVAHDNVTKV
     ATGEAGNVTD RWILHNLNET IAKVTENFDK FEFGVAGHIL YNFIWEEFAN WYVELTKEVL
     YSDNEDDKVI TRSVLLYTLD KILRLLHSIM PFVTEEIFGQ YAEGSIVTAA YPTVNPAFED
     LAAHTGVESL KDLIRAVRNA RAEVNVAPSK PITILVKTSD SDLEAFFNSN VNYIKRFTNP
     EHLEIASTIP APELAMSSVI TGAEIFLPLV DLLNVEEELA RLEKELAKWQ KELDMVGKKL
     SNERFVANAK PEVVQKEKDK QADYQAKYDV TVARIDEMKK LVK
 
 
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