SYV_THEAC
ID SYV_THEAC Reviewed; 791 AA.
AC Q9HM29;
DT 07-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2001, sequence version 1.
DT 03-AUG-2022, entry version 110.
DE RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02005};
DE EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02005};
DE AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02005};
DE Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02005};
GN Name=valS {ECO:0000255|HAMAP-Rule:MF_02005}; OrderedLocusNames=Ta0040;
OS Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC
OS 15155 / AMRC-C165).
OC Archaea; Candidatus Thermoplasmatota; Thermoplasmata; Thermoplasmatales;
OC Thermoplasmataceae; Thermoplasma.
OX NCBI_TaxID=273075;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165;
RX PubMed=11029001; DOI=10.1038/35035069;
RA Ruepp A., Graml W., Santos-Martinez M.-L., Koretke K.K., Volker C.,
RA Mewes H.-W., Frishman D., Stocker S., Lupas A.N., Baumeister W.;
RT "The genome sequence of the thermoacidophilic scavenger Thermoplasma
RT acidophilum.";
RL Nature 407:508-513(2000).
CC -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC inadvertently accommodate and process structurally similar amino acids
CC such as threonine, to avoid such errors, it has a 'posttransfer'
CC editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC dependent manner. {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_02005};
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC one for editing. The misactivated threonine is translocated from the
CC active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC ValS type 2 subfamily. {ECO:0000255|HAMAP-Rule:MF_02005}.
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DR EMBL; AL445063; CAC11189.1; -; Genomic_DNA.
DR RefSeq; WP_010900468.1; NC_002578.1.
DR AlphaFoldDB; Q9HM29; -.
DR SMR; Q9HM29; -.
DR STRING; 273075.Ta0040; -.
DR PRIDE; Q9HM29; -.
DR EnsemblBacteria; CAC11189; CAC11189; CAC11189.
DR GeneID; 1455707; -.
DR KEGG; tac:Ta0040; -.
DR eggNOG; arCOG00808; Archaea.
DR HOGENOM; CLU_001493_0_2_2; -.
DR OMA; FATKLWN; -.
DR OrthoDB; 4914at2157; -.
DR Proteomes; UP000001024; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004832; F:valine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006438; P:valyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd07962; Anticodon_Ia_Val; 1.
DR Gene3D; 3.40.50.620; -; 2.
DR Gene3D; 3.90.740.10; -; 1.
DR HAMAP; MF_02005; Val_tRNA_synth_type2; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033705; Anticodon_Ia_Val.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR022874; Valine-tRNA_ligase_type_2.
DR InterPro; IPR002303; Valyl-tRNA_ligase.
DR PANTHER; PTHR11946; PTHR11946; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 1.
DR PRINTS; PR00986; TRNASYNTHVAL.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
DR TIGRFAMs; TIGR00422; valS; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..791
FT /note="Valine--tRNA ligase"
FT /id="PRO_0000224637"
FT MOTIF 40..50
FT /note="'HIGH' region"
FT MOTIF 521..525
FT /note="'KMSKS' region"
FT BINDING 524
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02005"
SQ SEQUENCE 791 AA; 91400 MW; 0FE25F5CCCC79E12 CRC64;
MDIDVNQMEE KWIRYWDEKD VYRFEPADRD KVFAIDTPPP TVSGKMHMGH SFSYPHIDFI
ARYKRMRGYH VFFPWGFDDN GLPTERYVEK ETGIKPSDSN VEEFIRLCKE ISESSEKSLL
EGWKRIGMSC YFKDYYVTSS PESIRISQSM FLDLVRKGRV YRDLAPSIRC PTCKTSISQI
EMKDQEMHTK LVYINFSVGD RPLTIATTRP EMLGSCVAVF VNPDDARYRD LIGKEATVPI
FGNHVRIMAD ASVDMNFGTG AEMVCTFGDQ NDLDLWKKYN LPLKISIDKD GRMTEEAGPL
KGLSISDARK KIVEILREGG HVVKEESIKH SVNTHERCGT PIEIFIEKQW FIKYLDLKDA
FIENGRKIEW TPEYMRVRYE NWVNGLKWDW LISRQRYYGV PFPVWYCADC GNTVYADESE
LPVDPRIQKP SKKCDRCGST NLVPERDVMD TWATSSLTPR IALTHFGLFD KYYPEDLRGQ
GHDIISFWAF TTIARSKIHD DRIPWFRIMI SGNVYDMYGE KMSKSKGNIV DIYSMIDKYG
ADALRFWAST VSQGDDIRIK DQDFTRGRRT VIKMYNAKKL IDILKGDRKI RLFEDVKHPV
NRWILTEDSR IMETITTHMD NYEVSKARTA LDTFFWNVFC DNYLEMIKPI IQKASAAGDY
DTVDETVYTA SKVMLDVAKA YAPIMPFIAE EIYQTIDFPG RKISIHVDSW PDEKRRYSDA
NEEVSYIVSV IDAIRSAKSA AKVSVGTRVK VASVKGRKDL IEKYRDLLSG MLRIDSMEIA
DGDAVDATVF P