SYV_WIGBR
ID SYV_WIGBR Reviewed; 881 AA.
AC Q8D294;
DT 07-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2003, sequence version 1.
DT 03-AUG-2022, entry version 101.
DE RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02004};
DE EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02004};
DE AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02004};
DE Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02004};
GN Name=valS {ECO:0000255|HAMAP-Rule:MF_02004}; OrderedLocusNames=WIGBR4600;
OS Wigglesworthia glossinidia brevipalpis.
OC Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales;
OC Erwiniaceae; Wigglesworthia.
OX NCBI_TaxID=36870;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=12219091; DOI=10.1038/ng986;
RA Akman L., Yamashita A., Watanabe H., Oshima K., Shiba T., Hattori M.,
RA Aksoy S.;
RT "Genome sequence of the endocellular obligate symbiont of tsetse flies,
RT Wigglesworthia glossinidia.";
RL Nat. Genet. 32:402-407(2002).
CC -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC inadvertently accommodate and process structurally similar amino acids
CC such as threonine, to avoid such errors, it has a 'posttransfer'
CC editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC dependent manner. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_02004};
CC -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC one for editing. The misactivated threonine is translocated from the
CC active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02004}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC ValS type 1 subfamily. {ECO:0000255|HAMAP-Rule:MF_02004}.
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DR EMBL; BA000021; BAC24606.1; -; Genomic_DNA.
DR RefSeq; WP_011070264.1; NC_004344.2.
DR AlphaFoldDB; Q8D294; -.
DR SMR; Q8D294; -.
DR STRING; 36870.25166416; -.
DR EnsemblBacteria; BAC24606; BAC24606; BAC24606.
DR KEGG; wbr:valS; -.
DR eggNOG; COG0525; Bacteria.
DR HOGENOM; CLU_001493_0_2_6; -.
DR OMA; RQWYIRN; -.
DR OrthoDB; 32262at2; -.
DR Proteomes; UP000000562; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004832; F:valine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006438; P:valyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd07962; Anticodon_Ia_Val; 1.
DR Gene3D; 3.40.50.620; -; 2.
DR Gene3D; 3.90.740.10; -; 1.
DR HAMAP; MF_02004; Val_tRNA_synth_type1; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033705; Anticodon_Ia_Val.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR002303; Valyl-tRNA_ligase.
DR PANTHER; PTHR11946; PTHR11946; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 1.
DR PRINTS; PR00986; TRNASYNTHVAL.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
DR TIGRFAMs; TIGR00422; valS; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis; Reference proteome.
FT CHAIN 1..881
FT /note="Valine--tRNA ligase"
FT /id="PRO_0000224596"
FT MOTIF 42..52
FT /note="'HIGH' region"
FT MOTIF 554..558
FT /note="'KMSKS' region"
FT BINDING 557
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02004"
SQ SEQUENCE 881 AA; 104544 MW; 4C2897194995468F CRC64;
MKNPYDSKKI ESYFFMFWKK NNLFKKKLNS NKDNFCIILP PPNITGDLHV GHAFQQSIID
IFIRYNYMKG NNVLLQSGID HAGISTQSIL EKKIYFYENK NRFDYGRKNF IKEIWKWKEE
SEKKICYQIN KLGCFTDLNK IRFTMDKDSC KAVNNVFLKL YKDKLIYKKK KLMHWDVKLR
TVISDLEIEN REINGKLWYI KYFFSENSNK NSKLNFLEIA TTRPETIFGD VAVAVNPLDA
RYNNLIGKYI KVPLTNRSIP IIQDDYVKMD YGSGCVKITP GHDFNDFSIC KNHKLNIINI
LTISGKICKK PKVYDFNGNS VSDTNIKIPK ELQGLSISEA RNNIVYKLNR KEYITKFEYK
KVVLPFGDRS GDILEPMLTN QWYIKTKKLS EVAIEAVKEK KIKFISKQYE NMYFGWMENI
KDWCISRQLW WGHRIPIWYD VNKNQYPGIS ESDVRDNFKI NKEEILTQEE DVLDTWFSSA
IWSFASLGWP QKSIKFDTFH PTNLIISGFD IIYFWISRMI MLTMYIIKDS FGNPQIPFKN
IFITGLIRDK NGIKMSKSKG NVIDPIDIID GISLEDLIKK RTKEISNIKL IKKIEKITKK
EFPNGIQNHG ADAVRLSMAS ISCSNRKINI DIKKIIGYKN FCNKLWNVSK FIIINLKNKK
VSFEEKEINL HKIDNWILHK YNKVFKYYKY NIDNFRLDLV VNILYEFIWH QFCDWYIENS
KIIFKNNIIS RLNNTCYTLF FILENSLKML HPFIPFITEE IWKNLSKMVR NERKNTTILE
FFPKKYLFLK KDNSFNEIEC IKNIITCIRK LKFEKKTKFN KLVDVCFINN SYEEKIIILN
NIEIIKNIAF VKNVDFSRSI PKNVLKKDIK IINNIKIYIY N