SYV_WOLTR
ID SYV_WOLTR Reviewed; 855 AA.
AC Q5GRK0;
DT 07-MAR-2006, integrated into UniProtKB/Swiss-Prot.
DT 01-MAR-2005, sequence version 1.
DT 03-AUG-2022, entry version 107.
DE RecName: Full=Valine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_02005};
DE EC=6.1.1.9 {ECO:0000255|HAMAP-Rule:MF_02005};
DE AltName: Full=Valyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_02005};
DE Short=ValRS {ECO:0000255|HAMAP-Rule:MF_02005};
GN Name=valS {ECO:0000255|HAMAP-Rule:MF_02005}; OrderedLocusNames=Wbm0786;
OS Wolbachia sp. subsp. Brugia malayi (strain TRS).
OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales;
OC Anaplasmataceae; Wolbachieae; Wolbachia; unclassified Wolbachia.
OX NCBI_TaxID=292805;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=TRS;
RX PubMed=15780005; DOI=10.1371/journal.pbio.0030121;
RA Foster J., Ganatra M., Kamal I., Ware J., Makarova K., Ivanova N.,
RA Bhattacharyya A., Kapatral V., Kumar S., Posfai J., Vincze T., Ingram J.,
RA Moran L., Lapidus A., Omelchenko M., Kyrpides N., Ghedin E., Wang S.,
RA Goltsman E., Joukov V., Ostrovskaya O., Tsukerman K., Mazur M., Comb D.,
RA Koonin E., Slatko B.;
RT "The Wolbachia genome of Brugia malayi: endosymbiont evolution within a
RT human pathogenic nematode.";
RL PLoS Biol. 3:599-614(2005).
CC -!- FUNCTION: Catalyzes the attachment of valine to tRNA(Val). As ValRS can
CC inadvertently accommodate and process structurally similar amino acids
CC such as threonine, to avoid such errors, it has a 'posttransfer'
CC editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-
CC dependent manner. {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- CATALYTIC ACTIVITY:
CC Reaction=ATP + L-valine + tRNA(Val) = AMP + diphosphate + L-valyl-
CC tRNA(Val); Xref=Rhea:RHEA:10704, Rhea:RHEA-COMP:9672, Rhea:RHEA-
CC COMP:9708, ChEBI:CHEBI:30616, ChEBI:CHEBI:33019, ChEBI:CHEBI:57762,
CC ChEBI:CHEBI:78442, ChEBI:CHEBI:78537, ChEBI:CHEBI:456215; EC=6.1.1.9;
CC Evidence={ECO:0000255|HAMAP-Rule:MF_02005};
CC -!- SUBUNIT: Monomer. {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- DOMAIN: ValRS has two distinct active sites: one for aminoacylation and
CC one for editing. The misactivated threonine is translocated from the
CC active site to the editing site. {ECO:0000255|HAMAP-Rule:MF_02005}.
CC -!- SIMILARITY: Belongs to the class-I aminoacyl-tRNA synthetase family.
CC ValS type 2 subfamily. {ECO:0000255|HAMAP-Rule:MF_02005}.
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DR EMBL; AE017321; AAW71374.1; -; Genomic_DNA.
DR RefSeq; WP_011256983.1; NC_006833.1.
DR AlphaFoldDB; Q5GRK0; -.
DR SMR; Q5GRK0; -.
DR STRING; 292805.Wbm0786; -.
DR PRIDE; Q5GRK0; -.
DR EnsemblBacteria; AAW71374; AAW71374; Wbm0786.
DR KEGG; wbm:Wbm0786; -.
DR eggNOG; COG0525; Bacteria.
DR HOGENOM; CLU_001493_0_2_5; -.
DR OMA; RQWYIRN; -.
DR OrthoDB; 32262at2; -.
DR Proteomes; UP000000534; Chromosome.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0002161; F:aminoacyl-tRNA editing activity; IEA:InterPro.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-UniRule.
DR GO; GO:0004832; F:valine-tRNA ligase activity; IEA:UniProtKB-UniRule.
DR GO; GO:0006438; P:valyl-tRNA aminoacylation; IEA:UniProtKB-UniRule.
DR CDD; cd07962; Anticodon_Ia_Val; 1.
DR Gene3D; 3.40.50.620; -; 2.
DR HAMAP; MF_02005; Val_tRNA_synth_type2; 1.
DR InterPro; IPR001412; aa-tRNA-synth_I_CS.
DR InterPro; IPR002300; aa-tRNA-synth_Ia.
DR InterPro; IPR033705; Anticodon_Ia_Val.
DR InterPro; IPR013155; M/V/L/I-tRNA-synth_anticd-bd.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR InterPro; IPR009080; tRNAsynth_Ia_anticodon-bd.
DR InterPro; IPR009008; Val/Leu/Ile-tRNA-synth_edit.
DR InterPro; IPR022874; Valine-tRNA_ligase_type_2.
DR InterPro; IPR002303; Valyl-tRNA_ligase.
DR PANTHER; PTHR11946; PTHR11946; 1.
DR Pfam; PF08264; Anticodon_1; 1.
DR Pfam; PF00133; tRNA-synt_1; 1.
DR PRINTS; PR00986; TRNASYNTHVAL.
DR SUPFAM; SSF47323; SSF47323; 1.
DR SUPFAM; SSF50677; SSF50677; 1.
DR TIGRFAMs; TIGR00422; valS; 1.
DR PROSITE; PS00178; AA_TRNA_LIGASE_I; 1.
PE 3: Inferred from homology;
KW Aminoacyl-tRNA synthetase; ATP-binding; Cytoplasm; Ligase;
KW Nucleotide-binding; Protein biosynthesis.
FT CHAIN 1..855
FT /note="Valine--tRNA ligase"
FT /id="PRO_0000224620"
FT MOTIF 42..52
FT /note="'HIGH' region"
FT MOTIF 574..578
FT /note="'KMSKS' region"
FT BINDING 577
FT /ligand="ATP"
FT /ligand_id="ChEBI:CHEBI:30616"
FT /evidence="ECO:0000255|HAMAP-Rule:MF_02005"
SQ SEQUENCE 855 AA; 98630 MW; 73355CE1631D2D90 CRC64;
MLKEKYSFKE VENKYNILWE DSRVYKWDGK KENTFTIDTP PPTISGKLHI GHIFSYCHTD
FIARFQRMLG KDIFYPIGFD DNGLPTERLV EQTYKTRARE VGREKFIEMC HEVIEKSKQE
FKELLRSVGI SYDWSLEYHT ISKETVTLSQ MSFIDLYNKG YAYRKMQPIL WDPVDKTAIA
QAEIEDKVCE SSLNTITFST EENEQIDIAT TRPELFLACV AVFCHPEDAR YAHLIGKTSV
VPIIGVKVPI IADGRVKIDK GTGLVMCCTF GDELDIYWQQ KHNLPMKIII DQDGKINLDS
MYDNNRSQYQ GIGMTGERST GVIKEGAISP HYDVIPVRNT RIYDEINGLK VKEARKKIIK
ILTERGLLTG STNISHSVKC AERSGVSLEI LPTYQWFIKT LDQKAQVLDK VKECNWYPST
MRKRMEVWIE GLNWDWCISR QRYFGVPFPV WYSRRKGEEG KVILAEVEDL PVDPLKDLPK
GYSKEEVVPD QDVMDTWATS AITPQLSALA VNSEFSLPDH RYNTIFPADL RSQSHEIIRT
WAFYTILKAY YHANSLPWKN IMVSGWCLAD DKKKMSKSKG NIITPKSILD TYGADVVRYW
TANSRLGVDT VYSENILKIG KRLVTKLWNA SKFVSIFMER YQAVSINSVS ETMDQWILSK
LYKVIEKATN NLLQFEYCEA LGAVEGFFWK DFCDNYLELA KKRAYGDKVS SKANLSAKQS
LTYVLNTILR LLAPFLPYIT EQIYHQLYSD NSVHNRGNWP NKEELIYDKH SEEMGDKFMQ
ILNLVRKIKA DNNVSVKHLI KKLMIKANVK EDKLNQSAQN DLQTVCNAEM IEWSENAQAG
LITENGKFIV SIDLY