T178A_RAT
ID T178A_RAT Reviewed; 297 AA.
AC Q68FV0;
DT 15-MAY-2007, integrated into UniProtKB/Swiss-Prot.
DT 11-OCT-2004, sequence version 1.
DT 03-AUG-2022, entry version 90.
DE RecName: Full=Transmembrane protein 178A;
DE Flags: Precursor;
GN Name=Tmem178a; Synonyms=Tmem178;
OS Rattus norvegicus (Rat).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC Murinae; Rattus.
OX NCBI_TaxID=10116;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Kidney;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA project:
RT the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- FUNCTION: Acts as a negative regulator of osteoclast differentiation in
CC basal and inflammatory conditions by regulating TNFSF11-induced Ca (2+)
CC fluxes, thereby controlling the induction of NFATC1.
CC {ECO:0000250|UniProtKB:Q9CZ16}.
CC -!- SUBUNIT: Interacts with STIM1. {ECO:0000250|UniProtKB:Q9CZ16}.
CC -!- SUBCELLULAR LOCATION: Endoplasmic reticulum membrane
CC {ECO:0000250|UniProtKB:Q9CZ16}; Multi-pass membrane protein
CC {ECO:0000255}.
CC -!- SIMILARITY: Belongs to the TMEM178 family. {ECO:0000305}.
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DR EMBL; BC079338; AAH79338.1; -; mRNA.
DR RefSeq; NP_001004282.1; NM_001004282.1.
DR AlphaFoldDB; Q68FV0; -.
DR STRING; 10116.ENSRNOP00000010927; -.
DR GlyGen; Q68FV0; 1 site.
DR PaxDb; Q68FV0; -.
DR Ensembl; ENSRNOT00000010927; ENSRNOP00000010927; ENSRNOG00000007907.
DR GeneID; 362691; -.
DR KEGG; rno:362691; -.
DR UCSC; RGD:1303057; rat.
DR CTD; 130733; -.
DR RGD; 1303057; Tmem178a.
DR eggNOG; ENOG502R2WV; Eukaryota.
DR InParanoid; Q68FV0; -.
DR OrthoDB; 1336222at2759; -.
DR PhylomeDB; Q68FV0; -.
DR TreeFam; TF331307; -.
DR PRO; PR:Q68FV0; -.
DR Proteomes; UP000002494; Chromosome 6.
DR GO; GO:0005789; C:endoplasmic reticulum membrane; ISS:UniProtKB.
DR GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR GO; GO:0016020; C:membrane; IBA:GO_Central.
DR GO; GO:0045671; P:negative regulation of osteoclast differentiation; ISS:UniProtKB.
DR GO; GO:0051480; P:regulation of cytosolic calcium ion concentration; ISS:UniProtKB.
DR InterPro; IPR004031; PMP22/EMP/MP20/Claudin.
DR InterPro; IPR039625; T178A/B.
DR PANTHER; PTHR32005; PTHR32005; 1.
DR Pfam; PF13903; Claudin_2; 1.
PE 2: Evidence at transcript level;
KW Endoplasmic reticulum; Glycoprotein; Membrane; Reference proteome; Signal;
KW Transmembrane; Transmembrane helix.
FT SIGNAL 1..25
FT /evidence="ECO:0000255"
FT CHAIN 26..297
FT /note="Transmembrane protein 178A"
FT /id="PRO_0000287282"
FT TOPO_DOM 26..179
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 180..200
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 201..208
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT TRANSMEM 209..229
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 230..257
FT /note="Extracellular"
FT /evidence="ECO:0000255"
FT TRANSMEM 258..278
FT /note="Helical"
FT /evidence="ECO:0000255"
FT TOPO_DOM 279..297
FT /note="Cytoplasmic"
FT /evidence="ECO:0000255"
FT REGION 41..86
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CARBOHYD 158
FT /note="N-linked (GlcNAc...) asparagine"
FT /evidence="ECO:0000255"
SQ SEQUENCE 297 AA; 33080 MW; 476C75629798E664 CRC64;
MEPRALVTAL SLGLSLCSLG LLVTAIFTDH WYETDPRRHK ESCERSRAGA DPPDQKNRLM
PLSHLPLRDS PPLGRRLLPG GPGRSDPESW RSLLGLGGLD AECGRPLFAT YSGLWRKCYF
LGIDRDIDTL ILKGIAQRCT AVKYHFSQPI RLRNIPFNLT KIIQQDEWHL LHLRRITAGF
LGMAVAVLLC GCIVATVSFF WEESLTQHVA GLLFLMTGIF CTISLCTYAA SVSYDLNRVP
KLIYSLPHDV EHGYSWSIFC AWCSLGFIVA AGGLCIAYPF ISRTKIAHLK SGRDSTV