BP73_ORYSJ
ID BP73_ORYSJ Reviewed; 375 AA.
AC Q8L4E7; Q8RYA0; Q94HF4;
DT 12-APR-2005, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2002, sequence version 1.
DT 03-AUG-2022, entry version 92.
DE RecName: Full=SAP-like protein BP-73;
DE AltName: Full=OsBP-73;
DE AltName: Full=Riaa1;
GN Name=BP-73; OrderedLocusNames=Os03g0183100, LOC_Os03g08480;
GN ORFNames=OSJNBa0032G08.14;
OS Oryza sativa subsp. japonica (Rice).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX NCBI_TaxID=39947;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA / MRNA], FUNCTION, SUBUNIT, TISSUE
RP SPECIFICITY, AND DEVELOPMENTAL STAGE.
RC STRAIN=cv. Hanfeng, and cv. Zhonghua 11; TISSUE=Immature seed;
RX PubMed=12956528; DOI=10.1023/a:1024854101965;
RA Chen J., Tang W.-H., Hong M.-M., Wang Z.-Y.;
RT "OsBP-73, a rice gene, encodes a novel DNA-binding protein with a SAP-like
RT domain and its genetics interference by double-stranded RNA inhibits rice
RT growth.";
RL Plant Mol. Biol. 52:579-590(2003).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16109971; DOI=10.1101/gr.3869505;
RG The rice chromosome 3 sequencing consortium;
RA Buell C.R., Yuan Q., Ouyang S., Liu J., Zhu W., Wang A., Maiti R., Haas B.,
RA Wortman J., Pertea M., Jones K.M., Kim M., Overton L., Tsitrin T.,
RA Fadrosh D., Bera J., Weaver B., Jin S., Johri S., Reardon M., Webb K.,
RA Hill J., Moffat K., Tallon L., Van Aken S., Lewis M., Utterback T.,
RA Feldblyum T., Zismann V., Iobst S., Hsiao J., de Vazeille A.R.,
RA Salzberg S.L., White O., Fraser C.M., Yu Y., Kim H., Rambo T., Currie J.,
RA Collura K., Kernodle-Thompson S., Wei F., Kudrna K., Ammiraju J.S.S.,
RA Luo M., Goicoechea J.L., Wing R.A., Henry D., Oates R., Palmer M.,
RA Pries G., Saski C., Simmons J., Soderlund C., Nelson W., de la Bastide M.,
RA Spiegel L., Nascimento L., Huang E., Preston R., Zutavern T., Palmer L.,
RA O'Shaughnessy A., Dike S., McCombie W.R., Minx P., Cordum H., Wilson R.,
RA Jin W., Lee H.R., Jiang J., Jackson S.;
RT "Sequence, annotation, and analysis of synteny between rice chromosome 3
RT and diverged grass species.";
RL Genome Res. 15:1284-1291(2005).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Nipponbare;
RX PubMed=16100779; DOI=10.1038/nature03895;
RG International rice genome sequencing project (IRGSP);
RT "The map-based sequence of the rice genome.";
RL Nature 436:793-800(2005).
RN [4]
RP GENOME REANNOTATION.
RC STRAIN=cv. Nipponbare;
RX PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT "Improvement of the Oryza sativa Nipponbare reference genome using next
RT generation sequence and optical map data.";
RL Rice 6:4-4(2013).
RN [5]
RP NUCLEOTIDE SEQUENCE [MRNA] OF 293-375.
RA Peng R., Yao Q., Xiong A., Li X., Fan H.;
RL Submitted (JAN-2002) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: May regulate cell proliferation and plant growth.
CC {ECO:0000269|PubMed:12956528}.
CC -!- SUBUNIT: Binds to the DNA in the promoter region of WAXY containing the
CC sequence 5'-ACGCACGCTAACGTGA-3'. {ECO:0000269|PubMed:12956528}.
CC -!- TISSUE SPECIFICITY: Expressed in tissues with high cell division
CC activities: in root tips, stem node, panicle, flower and immature seed.
CC Weakly expressed in root and leaf. {ECO:0000269|PubMed:12956528}.
CC -!- DEVELOPMENTAL STAGE: Expressed in developing panicle, and in developing
CC seed up to 15 days after flowering. Expression is reduced in the late
CC stages of seed development. {ECO:0000269|PubMed:12956528}.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAK92634.1; Type=Erroneous gene model prediction; Evidence={ECO:0000305};
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DR EMBL; AJ315790; CAC86222.1; -; Genomic_DNA.
DR EMBL; AJ315791; CAC86223.1; -; mRNA.
DR EMBL; AC079633; AAK92634.1; ALT_SEQ; Genomic_DNA.
DR EMBL; AP014959; BAS82645.1; -; Genomic_DNA.
DR EMBL; AY072715; AAL86018.1; -; mRNA.
DR RefSeq; XP_015630580.1; XM_015775094.1.
DR RefSeq; XP_015630581.1; XM_015775095.1.
DR RefSeq; XP_015630582.1; XM_015775096.1.
DR RefSeq; XP_015630583.1; XM_015775097.1.
DR RefSeq; XP_015630584.1; XM_015775098.1.
DR AlphaFoldDB; Q8L4E7; -.
DR SMR; Q8L4E7; -.
DR STRING; 4530.OS03T0183100-02; -.
DR PaxDb; Q8L4E7; -.
DR PRIDE; Q8L4E7; -.
DR EnsemblPlants; Os03t0183100-01; Os03t0183100-01; Os03g0183100.
DR EnsemblPlants; Os03t0183100-02; Os03t0183100-02; Os03g0183100.
DR GeneID; 4331846; -.
DR Gramene; Os03t0183100-01; Os03t0183100-01; Os03g0183100.
DR Gramene; Os03t0183100-02; Os03t0183100-02; Os03g0183100.
DR KEGG; osa:4331846; -.
DR eggNOG; ENOG502QQ4E; Eukaryota.
DR HOGENOM; CLU_062947_0_0_1; -.
DR InParanoid; Q8L4E7; -.
DR OMA; GRNRNPD; -.
DR OrthoDB; 1189737at2759; -.
DR Proteomes; UP000000763; Chromosome 3.
DR Proteomes; UP000059680; Chromosome 3.
DR ExpressionAtlas; Q8L4E7; baseline and differential.
DR Genevisible; Q8L4E7; OS.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006353; P:DNA-templated transcription, termination; IEA:InterPro.
DR GO; GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.
DR InterPro; IPR011112; Rho_N.
DR InterPro; IPR036269; Rho_N_sf.
DR Pfam; PF07498; Rho_N; 1.
DR SMART; SM00959; Rho_N; 1.
DR SUPFAM; SSF68912; SSF68912; 1.
PE 1: Evidence at protein level;
KW DNA-binding; Growth regulation; Reference proteome.
FT CHAIN 1..375
FT /note="SAP-like protein BP-73"
FT /id="PRO_0000064974"
FT REGION 46..113
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 130..233
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 257..315
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 338..375
FT /note="Interaction with WAXY"
FT COMPBIAS 52..77
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 91..109
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 130..147
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 161..182
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 183..200
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 264..279
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 291..308
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT CONFLICT 293
FT /note="S -> A (in Ref. 5; AAL86018)"
FT /evidence="ECO:0000305"
SQ SEQUENCE 375 AA; 41765 MW; 8996F3C52FC1C27D CRC64;
MLLPPHPGRT LPAYHGDNRF LLGACFLSKL PMLRPMKLSL VCSANPNNHR SRSSDITRHQ
KGGSARRKSK PYQEKDDSEN IDEFDTDIMS SKNGPPISLT SNSRPQATSV PGEREKEIVE
LFKRVQAQLR ARGKGKEEKK PEQAKAQGER GSVDSLLNLL RKHSVDQRRK SGDEKEQSVD
QTKRSNESGN KQNSSIFIKN DTQEEQKKPH PAAFKRPASN FRRRSPVPNV KFQPVTNVDA
ERVINNINDA VQEAKPTLEN KAATDEPDSV STFEPNSVIE PENLSLDDLD HISDDEPDAS
DTDEPSGEYD EPSLQIPSVP IIDESHDTTL KSSLGGPDLS TLKVTELREL AKSRGIKGYS
KMKKNDLVEL LSNMA
