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T3JAM_MOUSE
ID   T3JAM_MOUSE             Reviewed;         513 AA.
AC   Q8C0G2; Q8BY50; Q8K1Y9;
DT   07-JUN-2004, integrated into UniProtKB/Swiss-Prot.
DT   07-JUN-2004, sequence version 2.
DT   03-AUG-2022, entry version 106.
DE   RecName: Full=TRAF3-interacting JNK-activating modulator;
DE   AltName: Full=TRAF3-interacting protein 3;
GN   Name=Traf3ip3; Synonyms=T3jam;
OS   Mus musculus (Mouse).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae;
OC   Murinae; Mus; Mus.
OX   NCBI_TaxID=10090;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, AND INTERACTION WITH TRAF3.
RC   STRAIN=C57BL/6J;
RX   PubMed=14572659; DOI=10.1016/s0014-5793(03)01072-x;
RA   Dadgostar H., Doyle S.E., Shahangian A., Garcia D.E., Cheng G.;
RT   "T3JAM, a novel protein that specifically interacts with TRAF3 and promotes
RT   the activation of JNK.";
RL   FEBS Lett. 553:403-407(2003).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=C57BL/6J; TISSUE=Testis, and Thymus;
RX   PubMed=16141072; DOI=10.1126/science.1112014;
RA   Carninci P., Kasukawa T., Katayama S., Gough J., Frith M.C., Maeda N.,
RA   Oyama R., Ravasi T., Lenhard B., Wells C., Kodzius R., Shimokawa K.,
RA   Bajic V.B., Brenner S.E., Batalov S., Forrest A.R., Zavolan M., Davis M.J.,
RA   Wilming L.G., Aidinis V., Allen J.E., Ambesi-Impiombato A., Apweiler R.,
RA   Aturaliya R.N., Bailey T.L., Bansal M., Baxter L., Beisel K.W., Bersano T.,
RA   Bono H., Chalk A.M., Chiu K.P., Choudhary V., Christoffels A.,
RA   Clutterbuck D.R., Crowe M.L., Dalla E., Dalrymple B.P., de Bono B.,
RA   Della Gatta G., di Bernardo D., Down T., Engstrom P., Fagiolini M.,
RA   Faulkner G., Fletcher C.F., Fukushima T., Furuno M., Futaki S.,
RA   Gariboldi M., Georgii-Hemming P., Gingeras T.R., Gojobori T., Green R.E.,
RA   Gustincich S., Harbers M., Hayashi Y., Hensch T.K., Hirokawa N., Hill D.,
RA   Huminiecki L., Iacono M., Ikeo K., Iwama A., Ishikawa T., Jakt M.,
RA   Kanapin A., Katoh M., Kawasawa Y., Kelso J., Kitamura H., Kitano H.,
RA   Kollias G., Krishnan S.P., Kruger A., Kummerfeld S.K., Kurochkin I.V.,
RA   Lareau L.F., Lazarevic D., Lipovich L., Liu J., Liuni S., McWilliam S.,
RA   Madan Babu M., Madera M., Marchionni L., Matsuda H., Matsuzawa S., Miki H.,
RA   Mignone F., Miyake S., Morris K., Mottagui-Tabar S., Mulder N., Nakano N.,
RA   Nakauchi H., Ng P., Nilsson R., Nishiguchi S., Nishikawa S., Nori F.,
RA   Ohara O., Okazaki Y., Orlando V., Pang K.C., Pavan W.J., Pavesi G.,
RA   Pesole G., Petrovsky N., Piazza S., Reed J., Reid J.F., Ring B.Z.,
RA   Ringwald M., Rost B., Ruan Y., Salzberg S.L., Sandelin A., Schneider C.,
RA   Schoenbach C., Sekiguchi K., Semple C.A., Seno S., Sessa L., Sheng Y.,
RA   Shibata Y., Shimada H., Shimada K., Silva D., Sinclair B., Sperling S.,
RA   Stupka E., Sugiura K., Sultana R., Takenaka Y., Taki K., Tammoja K.,
RA   Tan S.L., Tang S., Taylor M.S., Tegner J., Teichmann S.A., Ueda H.R.,
RA   van Nimwegen E., Verardo R., Wei C.L., Yagi K., Yamanishi H.,
RA   Zabarovsky E., Zhu S., Zimmer A., Hide W., Bult C., Grimmond S.M.,
RA   Teasdale R.D., Liu E.T., Brusic V., Quackenbush J., Wahlestedt C.,
RA   Mattick J.S., Hume D.A., Kai C., Sasaki D., Tomaru Y., Fukuda S.,
RA   Kanamori-Katayama M., Suzuki M., Aoki J., Arakawa T., Iida J., Imamura K.,
RA   Itoh M., Kato T., Kawaji H., Kawagashira N., Kawashima T., Kojima M.,
RA   Kondo S., Konno H., Nakano K., Ninomiya N., Nishio T., Okada M., Plessy C.,
RA   Shibata K., Shiraki T., Suzuki S., Tagami M., Waki K., Watahiki A.,
RA   Okamura-Oho Y., Suzuki H., Kawai J., Hayashizaki Y.;
RT   "The transcriptional landscape of the mammalian genome.";
RL   Science 309:1559-1563(2005).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC   STRAIN=C57BL/6J; TISSUE=Mammary gland;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [4]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Lung, and Spleen;
RX   PubMed=21183079; DOI=10.1016/j.cell.2010.12.001;
RA   Huttlin E.L., Jedrychowski M.P., Elias J.E., Goswami T., Rad R.,
RA   Beausoleil S.A., Villen J., Haas W., Sowa M.E., Gygi S.P.;
RT   "A tissue-specific atlas of mouse protein phosphorylation and expression.";
RL   Cell 143:1174-1189(2010).
RN   [5]
RP   FUNCTION, SUBCELLULAR LOCATION, AND DISRUPTION PHENOTYPE.
RX   PubMed=26195727; DOI=10.1084/jem.20150110;
RA   Zou Q., Jin J., Xiao Y., Hu H., Zhou X., Jie Z., Xie X., Li J.Y., Cheng X.,
RA   Sun S.C.;
RT   "T cell development involves TRAF3IP3-mediated ERK signaling in the
RT   Golgi.";
RL   J. Exp. Med. 212:1323-1336(2015).
RN   [6]
RP   FUNCTION, DISRUPTION PHENOTYPE, SUBCELLULAR LOCATION, AND INTERACTION WITH
RP   PPP2CA.
RX   PubMed=30115741; DOI=10.1084/jem.20180397;
RA   Yu X., Teng X.L., Wang F., Zheng Y., Qu G., Zhou Y., Hu Z., Wu Z.,
RA   Chang Y., Chen L., Li H.B., Su B., Lu L., Liu Z., Sun S.C., Zou Q.;
RT   "Metabolic control of regulatory T cell stability and function by TRAF3IP3
RT   at the lysosome.";
RL   J. Exp. Med. 215:2463-2476(2018).
RN   [7]
RP   FUNCTION, AND DISRUPTION PHENOTYPE.
RX   PubMed=31390091; DOI=10.15252/embj.2019102075;
RA   Zhu W., Li J., Zhang R., Cai Y., Wang C., Qi S., Chen S., Liang X., Qi N.,
RA   Hou F.;
RT   "TRAF3IP3 mediates the recruitment of TRAF3 to MAVS for antiviral innate
RT   immunity.";
RL   EMBO J. 38:e102075-e102075(2019).
CC   -!- FUNCTION: Adapter protein that plays essential roles in both innate and
CC       adaptive immunity. Plays a crucial role in the regulation of thymocyte
CC       development (PubMed:26195727). Mechanistically, mediates TCR-stimulated
CC       activation through recruiting MAP2K1/MEK1 to the Golgi and, thereby,
CC       facilitating the interaction of MAP2K1/MEK1 with its activator BRAF
CC       (PubMed:26195727). Also plays an essential role in regulatory T-cell
CC       stability and function by recruiting the serine-threonine phosphatase
CC       catalytic subunit (PPP2CA) to the lysosome, thereby facilitating the
CC       interaction of PP2Ac with the mTORC1 component RPTOR and restricting
CC       glycolytic metabolism (PubMed:30115741). Positively regulates TLR4
CC       signaling activity in macrophage-mediated inflammation by acting as a
CC       molecular clamp to facilitate LPS-induced translocation of TLR4 to
CC       lipid rafts (PubMed:30115741). In response to viral infection,
CC       facilitates the recruitment of TRAF3 to MAVS within mitochondria
CC       leading to IRF3 activation and interferon production (PubMed:30115741).
CC       However, participates in the maintenance of immune homeostasis and the
CC       prevention of overzealous innate immunity by promoting 'Lys-48'-
CC       dependent ubiquitination of TBK1 (By similarity).
CC       {ECO:0000250|UniProtKB:Q9Y228, ECO:0000269|PubMed:26195727,
CC       ECO:0000269|PubMed:30115741}.
CC   -!- SUBUNIT: Interacts (via its coiled-coil domain) with TRAF3 (via
CC       isoleucine zipper). Interacts with MAP2K1 (By similarity). Interacts
CC       with PPP2CA; this interaction targets PPP2CA to the lysosomes (By
CC       similarity). Interacts with MAVS (By similarity). Interacts with TBK1
CC       (By similarity). {ECO:0000250|UniProtKB:Q9Y228}.
CC   -!- SUBCELLULAR LOCATION: Cell membrane {ECO:0000250|UniProtKB:Q9Y228}.
CC       Golgi apparatus membrane {ECO:0000269|PubMed:26195727}; Single-pass
CC       type IV membrane protein {ECO:0000305}. Lysosome membrane
CC       {ECO:0000269|PubMed:30115741}. Mitochondrion outer membrane
CC       {ECO:0000250|UniProtKB:Q9Y228}. Note=Accumulates on the mitochondria
CC       after virus infection. {ECO:0000250|UniProtKB:Q9Y228}.
CC   -!- TISSUE SPECIFICITY: Expressed in bone marrow, spleen and thymus. Not
CC       detected in heart, kidney and liver. {ECO:0000269|PubMed:14572659}.
CC   -!- DISRUPTION PHENOTYPE: Knockout mice have considerably lower frequencies
CC       of CD4(+) and CD8(+) single positive thymocytes, and concomitantly
CC       higher frequencies of double positive thymocytes (PubMed:26195727).
CC       TRAF3IP3 deletion also affects regulatory T-cell transcriptional
CC       programs and stability (PubMed:30115741). In addition, mice show a
CC       severely compromised potential to induce interferon production and are
CC       vulnerable to RNA virus infection (PubMed:31390091).
CC       {ECO:0000269|PubMed:26195727, ECO:0000269|PubMed:30115741,
CC       ECO:0000269|PubMed:31390091}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAQ84304.1; Type=Frameshift; Evidence={ECO:0000305};
CC       Sequence=AAQ84304.1; Type=Miscellaneous discrepancy; Note=Sequencing errors.; Evidence={ECO:0000305};
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DR   EMBL; AY383616; AAQ84304.1; ALT_SEQ; mRNA.
DR   EMBL; AK031400; BAC27388.1; -; mRNA.
DR   EMBL; AK041994; BAC31127.2; -; mRNA.
DR   EMBL; BC036561; -; NOT_ANNOTATED_CDS; mRNA.
DR   CCDS; CCDS15634.1; -.
DR   RefSeq; NP_694777.3; NM_153137.4.
DR   AlphaFoldDB; Q8C0G2; -.
DR   SMR; Q8C0G2; -.
DR   BioGRID; 229607; 4.
DR   STRING; 10090.ENSMUSP00000040977; -.
DR   MEROPS; S01.372; -.
DR   iPTMnet; Q8C0G2; -.
DR   PhosphoSitePlus; Q8C0G2; -.
DR   EPD; Q8C0G2; -.
DR   MaxQB; Q8C0G2; -.
DR   PaxDb; Q8C0G2; -.
DR   PRIDE; Q8C0G2; -.
DR   ProteomicsDB; 254640; -.
DR   DNASU; 215243; -.
DR   GeneID; 215243; -.
DR   KEGG; mmu:215243; -.
DR   CTD; 80342; -.
DR   MGI; MGI:2441706; Traf3ip3.
DR   eggNOG; ENOG502RG0V; Eukaryota.
DR   InParanoid; Q8C0G2; -.
DR   OrthoDB; 484467at2759; -.
DR   PhylomeDB; Q8C0G2; -.
DR   BioGRID-ORCS; 215243; 2 hits in 72 CRISPR screens.
DR   ChiTaRS; Traf3ip3; mouse.
DR   PRO; PR:Q8C0G2; -.
DR   Proteomes; UP000000589; Unplaced.
DR   RNAct; Q8C0G2; protein.
DR   GO; GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005765; C:lysosomal membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
PE   1: Evidence at protein level;
KW   Cell membrane; Coiled coil; Golgi apparatus; Lysosome; Membrane;
KW   Mitochondrion; Mitochondrion outer membrane; Reference proteome;
KW   Transmembrane; Transmembrane helix.
FT   CHAIN           1..513
FT                   /note="TRAF3-interacting JNK-activating modulator"
FT                   /id="PRO_0000072404"
FT   TOPO_DOM        1..485
FT                   /note="Cytoplasmic"
FT                   /evidence="ECO:0000255"
FT   TRANSMEM        486..506
FT                   /note="Helical; Anchor for type IV membrane protein"
FT                   /evidence="ECO:0000255"
FT   TOPO_DOM        507..513
FT                   /note="Extracellular"
FT                   /evidence="ECO:0000255"
FT   REGION          1..96
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          130..171
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          381..402
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          266..488
FT                   /evidence="ECO:0000255"
FT   COMPBIAS        18..82
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        150..167
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        381..396
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   CONFLICT        185
FT                   /note="N -> K (in Ref. 2; BAC27388/BAC31127)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        355
FT                   /note="D -> G (in Ref. 2; BAC27388)"
FT                   /evidence="ECO:0000305"
SQ   SEQUENCE   513 AA;  58564 MW;  6FF754048DB64353 CRC64;
     MISSDSRSSP GLARWAESYE AKCERRQETR ENRRRRRNET TCRQPGKVLR TQHKERLQGA
     RQLQFLKRRN LEEEKKGQAR EQGPSSKTDG GTGQVSILKE SLPGANKASF PGQQETGISS
     EVFPALHHSS SGIQRDLGGH HASHGRAFPP QDSDIKKPHR QHRGTQTKAE EALPTIKNDA
     SQQTNCGVAV LDKDIIQLSE YLKEALHREL ILKKKMVILQ DLLPALIRAS DSSWKGQLNE
     DKLKGKLRSL ENQLYTCLQK HSPWGMKKVL LEMEDQRSSY EQKAKASLQK VLEEKMCAEQ
     QLQRAQLSLA LAEQKCQEWK SQYEALKEDW RTLGDQHREL ESQLHVLQSK LQGADSRDSQ
     MSQALQLLEN EHQELQTKLE SLQGDGEQQS SETQDLQDQL KKSEEEKQAL VSKVQQLQSL
     LQNQSLQLQE QEKLLKKDQG LPVWNPKLSL DEVKPEGTRK EKEEELRDQL QKETFQLQVK
     ENELQCGQWL PVLMVVIATA LAVFLANKGN LVI
 
 
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