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TAC1_ORYSJ
ID   TAC1_ORYSJ              Reviewed;         259 AA.
AC   Q0J059; B7EBP2; B9G4P4;
DT   07-OCT-2020, integrated into UniProtKB/Swiss-Prot.
DT   13-OCT-2009, sequence version 2.
DT   25-MAY-2022, entry version 94.
DE   RecName: Full=Protein TILLER ANGLE CONTROL 1 {ECO:0000303|PubMed:17908158};
GN   Name=TAC1 {ECO:0000303|PubMed:17908158};
GN   OrderedLocusNames=Os09g0529300 {ECO:0000312|EMBL:BAT09079.1},
GN   LOC_Os09g35980 {ECO:0000305};
GN   ORFNames=OsJ_30092 {ECO:0000312|EMBL:EEE70092.1};
OS   Oryza sativa subsp. japonica (Rice).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade;
OC   Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa.
OX   NCBI_TaxID=39947;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=16100779; DOI=10.1038/nature03895;
RG   International rice genome sequencing project (IRGSP);
RT   "The map-based sequence of the rice genome.";
RL   Nature 436:793-800(2005).
RN   [2]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=18089549; DOI=10.1093/nar/gkm978;
RG   The rice annotation project (RAP);
RT   "The rice annotation project database (RAP-DB): 2008 update.";
RL   Nucleic Acids Res. 36:D1028-D1033(2008).
RN   [3]
RP   GENOME REANNOTATION.
RC   STRAIN=cv. Nipponbare;
RX   PubMed=24280374; DOI=10.1186/1939-8433-6-4;
RA   Kawahara Y., de la Bastide M., Hamilton J.P., Kanamori H., McCombie W.R.,
RA   Ouyang S., Schwartz D.C., Tanaka T., Wu J., Zhou S., Childs K.L.,
RA   Davidson R.M., Lin H., Quesada-Ocampo L., Vaillancourt B., Sakai H.,
RA   Lee S.S., Kim J., Numa H., Itoh T., Buell C.R., Matsumoto T.;
RT   "Improvement of the Oryza sativa Nipponbare reference genome using next
RT   generation sequence and optical map data.";
RL   Rice 6:4-4(2013).
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nipponbare;
RX   PubMed=15685292; DOI=10.1371/journal.pbio.0030038;
RA   Yu J., Wang J., Lin W., Li S., Li H., Zhou J., Ni P., Dong W., Hu S.,
RA   Zeng C., Zhang J., Zhang Y., Li R., Xu Z., Li S., Li X., Zheng H., Cong L.,
RA   Lin L., Yin J., Geng J., Li G., Shi J., Liu J., Lv H., Li J., Wang J.,
RA   Deng Y., Ran L., Shi X., Wang X., Wu Q., Li C., Ren X., Wang J., Wang X.,
RA   Li D., Liu D., Zhang X., Ji Z., Zhao W., Sun Y., Zhang Z., Bao J., Han Y.,
RA   Dong L., Ji J., Chen P., Wu S., Liu J., Xiao Y., Bu D., Tan J., Yang L.,
RA   Ye C., Zhang J., Xu J., Zhou Y., Yu Y., Zhang B., Zhuang S., Wei H.,
RA   Liu B., Lei M., Yu H., Li Y., Xu H., Wei S., He X., Fang L., Zhang Z.,
RA   Zhang Y., Huang X., Su Z., Tong W., Li J., Tong Z., Li S., Ye J., Wang L.,
RA   Fang L., Lei T., Chen C.-S., Chen H.-C., Xu Z., Li H., Huang H., Zhang F.,
RA   Xu H., Li N., Zhao C., Li S., Dong L., Huang Y., Li L., Xi Y., Qi Q.,
RA   Li W., Zhang B., Hu W., Zhang Y., Tian X., Jiao Y., Liang X., Jin J.,
RA   Gao L., Zheng W., Hao B., Liu S.-M., Wang W., Yuan L., Cao M.,
RA   McDermott J., Samudrala R., Wang J., Wong G.K.-S., Yang H.;
RT   "The genomes of Oryza sativa: a history of duplications.";
RL   PLoS Biol. 3:266-281(2005).
RN   [5]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 2).
RC   STRAIN=cv. Nipponbare;
RX   PubMed=12869764; DOI=10.1126/science.1081288;
RG   The rice full-length cDNA consortium;
RT   "Collection, mapping, and annotation of over 28,000 cDNA clones from
RT   japonica rice.";
RL   Science 301:376-379(2003).
RN   [6]
RP   FUNCTION.
RX   PubMed=17908158; DOI=10.1111/j.1365-313x.2007.03284.x;
RA   Yu B., Lin Z., Li H., Li X., Li J., Wang Y., Zhang X., Zhu Z., Zhai W.,
RA   Wang X., Xie D., Sun C.;
RT   "TAC1, a major quantitative trait locus controlling tiller angle in rice.";
RL   Plant J. 52:891-898(2007).
CC   -!- FUNCTION: Involved in the regulation of tiller growth angle
CC       (PubMed:17908158). Promotes horizontal shoot growth (PubMed:17908158).
CC       TAC1 and LAZY1 play opposite functions in the regulation of tiller
CC       growth angle (PubMed:17908158). {ECO:0000269|PubMed:17908158}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q0J059-1; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q0J059-2; Sequence=VSP_060745, VSP_060746;
CC   -!- TISSUE SPECIFICITY: Expressed in the leaf sheath pulvinus, tiller base
CC       and tiller node. {ECO:0000269|PubMed:17908158}.
CC   -!- MISCELLANEOUS: Plants silencing TAC1 exhibit erect tillers with a very
CC       small tiller angle. {ECO:0000269|PubMed:17908158}.
CC   -!- SIMILARITY: Belongs to the TAC family. {ECO:0000305}.
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DR   EMBL; AP008215; BAF25656.2; -; Genomic_DNA.
DR   EMBL; AP014965; BAT09079.1; -; Genomic_DNA.
DR   EMBL; CM000146; EEE70092.1; -; Genomic_DNA.
DR   EMBL; AK066042; BAG89789.1; -; mRNA.
DR   RefSeq; XP_015612189.1; XM_015756703.1.
DR   RefSeq; XP_015612190.1; XM_015756704.1.
DR   RefSeq; XP_015612191.1; XM_015756705.1.
DR   AlphaFoldDB; Q0J059; -.
DR   SMR; Q0J059; -.
DR   EnsemblPlants; Os09t0529300-01; Os09t0529300-01; Os09g0529300. [Q0J059-2]
DR   EnsemblPlants; Os09t0529300-02; Os09t0529300-02; Os09g0529300. [Q0J059-1]
DR   Gramene; Os09t0529300-01; Os09t0529300-01; Os09g0529300. [Q0J059-2]
DR   Gramene; Os09t0529300-02; Os09t0529300-02; Os09g0529300. [Q0J059-1]
DR   KEGG; osa:4347655; -.
DR   HOGENOM; CLU_079213_0_0_1; -.
DR   InParanoid; Q0J059; -.
DR   OMA; NTEYCTI; -.
DR   OrthoDB; 1232505at2759; -.
DR   Proteomes; UP000000763; Chromosome 9.
DR   Proteomes; UP000007752; Chromosome 9.
DR   Proteomes; UP000059680; Chromosome 9.
DR   ExpressionAtlas; Q0J059; baseline and differential.
DR   GO; GO:0001763; P:morphogenesis of a branching structure; IMP:UniProtKB.
DR   GO; GO:0060771; P:phyllotactic patterning; IMP:UniProtKB.
DR   GO; GO:0040008; P:regulation of growth; IEA:UniProtKB-KW.
DR   InterPro; IPR044989; TAC1.
DR   PANTHER; PTHR38366; PTHR38366; 1.
PE   2: Evidence at transcript level;
KW   Alternative splicing; Growth regulation; Reference proteome.
FT   CHAIN           1..259
FT                   /note="Protein TILLER ANGLE CONTROL 1"
FT                   /id="PRO_0000451025"
FT   REGION          96..123
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          206..226
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          239..259
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOTIF           56..62
FT                   /note="IGT motif"
FT                   /evidence="ECO:0000305"
FT   VAR_SEQ         1..26
FT                   /note="MALKVFNWLNRKKHSNVEYCTINENK -> MSSIAPSMRTRVRIPGYLSFMY
FT                   HMFCCSHVVNSCFFSSIFFPDGV (in isoform 2)"
FT                   /id="VSP_060745"
FT   VAR_SEQ         234..259
FT                   /note="MRKMLGKKIHPEQLNGRSNAEGPVTA -> WFSSSLLYLLSLVTLYFTSLEF
FT                   ITLCSMVSAPHLTHMFYHIATTGVSIMHLASL (in isoform 2)"
FT                   /id="VSP_060746"
SQ   SEQUENCE   259 AA;  28955 MW;  7D63BD02EF9A9E61 CRC64;
     MALKVFNWLN RKKHSNVEYC TINENKAMEE KEDSLRASVT EQDTEALLLR DVLINGILAI
     GTLGHNVNSL CPESCIEQDE PIIMCDEKVE QEKCEEEKAE AKQDTPVTAP SEPASALEPA
     KMHSSSMKED NFMCFVKEEI LMHGMEVEDV PNIQERPLLM LEKVEKVRTT LADLFAAEAF
     SSSDAEDKCY PKIVIVAGAS TSKPTSCMEK MHHKKPTKPT SKPLKATRKL SRVMRKMLGK
     KIHPEQLNGR SNAEGPVTA
 
 
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