TAF2_CHICK
ID TAF2_CHICK Reviewed; 1168 AA.
AC Q5ZIT8;
DT 17-OCT-2006, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 70.
DE RecName: Full=Transcription initiation factor TFIID subunit 2;
DE AltName: Full=TBP-associated factor 150 kDa;
DE AltName: Full=Transcription initiation factor TFIID 150 kDa subunit;
DE Short=TAF(II)150;
DE Short=TAFII-150;
DE Short=TAFII150;
GN Name=TAF2; ORFNames=RCJMB04_23j21;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: The TFIID basal transcription factor complex plays a major
CC role in the initiation of RNA polymerase II (Pol II)-dependent
CC transcription. TFIID recognizes and binds promoters with or without a
CC TATA box via its subunit TBP, a TATA-box-binding protein, and promotes
CC assembly of the pre-initiation complex (PIC). The TFIID complex
CC consists of TBP and TBP-associated factors (TAFs).
CC {ECO:0000250|UniProtKB:Q6P1X5}.
CC -!- SUBUNIT: Component of the TFIID basal transcription factor complex,
CC composed of TATA-box-binding protein TBP, and a number of TBP-
CC associated factors (TAFs). {ECO:0000250|UniProtKB:Q6P1X5}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TAF2 family. {ECO:0000305}.
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DR EMBL; AJ720696; CAG32355.1; -; mRNA.
DR RefSeq; NP_001292091.1; NM_001305162.1.
DR AlphaFoldDB; Q5ZIT8; -.
DR SMR; Q5ZIT8; -.
DR STRING; 9031.ENSGALP00000026442; -.
DR MEROPS; M01.972; -.
DR GeneID; 428389; -.
DR KEGG; gga:428389; -.
DR CTD; 6873; -.
DR VEuPathDB; HostDB:geneid_428389; -.
DR eggNOG; KOG1932; Eukaryota.
DR InParanoid; Q5ZIT8; -.
DR OrthoDB; 142542at2759; -.
DR PhylomeDB; Q5ZIT8; -.
DR PRO; PR:Q5ZIT8; -.
DR Proteomes; UP000000539; Unplaced.
DR GO; GO:0005669; C:transcription factor TFIID complex; IBA:GO_Central.
DR GO; GO:0003682; F:chromatin binding; IBA:GO_Central.
DR GO; GO:0000976; F:transcription cis-regulatory region binding; IBA:GO_Central.
DR GO; GO:0006367; P:transcription initiation from RNA polymerase II promoter; IBA:GO_Central.
DR Gene3D; 1.10.390.10; -; 1.
DR Gene3D; 2.60.40.1730; -; 1.
DR InterPro; IPR042097; Aminopeptidase_N-like_N_sf.
DR InterPro; IPR016024; ARM-type_fold.
DR InterPro; IPR027268; Peptidase_M4/M1_CTD_sf.
DR InterPro; IPR037813; TAF2.
DR PANTHER; PTHR15137; PTHR15137; 1.
DR SUPFAM; SSF48371; SSF48371; 1.
DR SUPFAM; SSF63737; SSF63737; 1.
PE 2: Evidence at transcript level;
KW Nucleus; Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..1168
FT /note="Transcription initiation factor TFIID subunit 2"
FT /id="PRO_0000252426"
FT REGION 1039..1066
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1135..1168
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1143..1168
FT /note="Basic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1168 AA; 134023 MW; 6D88FA73F8541BAD CRC64;
MNRKKGDKGF ESPRPYKLTH QVVCINNINF QRKSVVGYVE LTIFPTVANL NRIKLNSKQC
RIYRVRVNDL EAAFIYNDPT LEVCHHESKQ RNLNYFSNAY AAAVSAVDPD AGNGELCIKV
PSELWKHVDE LKVLKVHINF SLDQPKGGLH FVVPNMEGSM AERGAHVFSC GYQNSTRFWF
PCVDSYSELC TWKLEYTVDA AMVAVSNGDL VETVYTHDMR KKTFHYMLAI PTAASNISLA
IGPFEILVDP YMHEVTHFCL PQLLPLLKHT TSYLHEVFEF YEEILTCRYP YSCFKTVFID
EAYVEVAAYA SMSIFSTNLL HSAMIIDETP LTRRCLAQAL AQQFFGCFIS RMSWSDEWVL
KGISGYIYGL WMKKTFGVNE YRHWIKQELD QIVAYELKTG GVLLHPIFGG GKEKDNPASH
LHFSIKHPHT LSWEYYTMFQ CKAHLVMRLI ENRISMEFML QVFNKLLSLA STASSQKFQS
HMWSQMLVST SGFLKSISNV SGKDIQPLIK QWVDQSGVVK FYGSFAFNRK RNVLELEIKQ
DYTSPGTQKY VGPLKVTVQE LDGSFNHTLQ IEENSLKHDI PCHSKSRRNK KKKIPLMNGE
EVDMDLSAMD ADSPLLWIRI DPDMSVLRKV EFEQSDFMWQ YQLRYERDVV AQEEAILALE
KFPTPASRLA LTDILEQEQC FYRVRMLACF CLAKIANSMV STWTGPPAMK SLFTRMFCCK
TCPNIVKTNN FMNFQSYFLQ KTMPVAMALL RDVHNLCPKE VLMFILDLIK YNDNRKNKFS
DNYYRAELID ALANSVTPAV SVNNEVRTLD NLNPDVRLIL EEITRFLNME KLLPSYRHTI
TVSCLKAIRV LQKNGHVPSD PALFKSYAEY GHFVDVRIAA LEAVVDYTKV DRSYEELQWL
LTMVQNDPVP YIRHKILDML TKNPPFTKNM ESPLCNEALV DQLWKLMNSG TSHDWRLRCG
AVDLYFTLFG LSRPSCLPLP ELGLVLNLKE KKAVLNPTII PESVANNQEP VNTTNNHGQP
VVFQNTEDDH LIKETASSIS GHQQGVKRKA DMPLGSPLEP GQILEKNEDS KVKLKIRFSN
SQEEEEIDMD TVHDSQAFIY HHLNMLERPS TPGKEQSSGE VTMHPVSAAP LSVFSKESNS
SKHSDHHHHH HHEHKKKKKK TLQVWIRP