TAF8_CHICK
ID TAF8_CHICK Reviewed; 244 AA.
AC Q5ZMS1;
DT 15-JAN-2008, integrated into UniProtKB/Swiss-Prot.
DT 23-NOV-2004, sequence version 1.
DT 03-AUG-2022, entry version 102.
DE RecName: Full=Transcription initiation factor TFIID subunit 8;
DE AltName: Full=TBP-associated factor 8;
GN Name=TAF8; ORFNames=RCJMB04_1f12;
OS Gallus gallus (Chicken).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae;
OC Phasianinae; Gallus.
OX NCBI_TaxID=9031;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=CB; TISSUE=Bursa of Fabricius;
RX PubMed=15642098; DOI=10.1186/gb-2004-6-1-r6;
RA Caldwell R.B., Kierzek A.M., Arakawa H., Bezzubov Y., Zaim J., Fiedler P.,
RA Kutter S., Blagodatski A., Kostovska D., Koter M., Plachy J., Carninci P.,
RA Hayashizaki Y., Buerstedde J.-M.;
RT "Full-length cDNAs from chicken bursal lymphocytes to facilitate gene
RT function analysis.";
RL Genome Biol. 6:R6.1-R6.9(2005).
CC -!- FUNCTION: The TFIID basal transcription factor complex plays a major
CC role in the initiation of RNA polymerase II (Pol II)-dependent
CC transcription. TFIID recognizes and binds promoters with or without a
CC TATA box via its subunit TBP, a TATA-box-binding protein, and promotes
CC assembly of the pre-initiation complex (PIC). The TFIID complex
CC consists of TBP and TBP-associated factors (TAFs). Mediates both basal
CC and activator-dependent transcription. {ECO:0000250|UniProtKB:Q7Z7C8}.
CC -!- SUBUNIT: Component of the TFIID basal transcription factor complex,
CC composed of TATA-box-binding protein TBP, and a number of TBP-
CC associated factors (TAFs). {ECO:0000250|UniProtKB:Q7Z7C8}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}. Cytoplasm {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the TAF8 family. {ECO:0000305}.
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DR EMBL; AJ719313; CAG30972.1; -; mRNA.
DR RefSeq; NP_001026094.1; NM_001030923.1.
DR AlphaFoldDB; Q5ZMS1; -.
DR SMR; Q5ZMS1; -.
DR STRING; 9031.ENSGALP00000042057; -.
DR PaxDb; Q5ZMS1; -.
DR Ensembl; ENSGALT00000005533; ENSGALP00000005523; ENSGALG00000003498.
DR GeneID; 419929; -.
DR KEGG; gga:419929; -.
DR CTD; 129685; -.
DR VEuPathDB; HostDB:geneid_419929; -.
DR eggNOG; KOG4336; Eukaryota.
DR GeneTree; ENSGT00390000017567; -.
DR HOGENOM; CLU_070829_0_0_1; -.
DR InParanoid; Q5ZMS1; -.
DR PhylomeDB; Q5ZMS1; -.
DR Reactome; R-GGA-6807505; RNA polymerase II transcribes snRNA genes.
DR PRO; PR:Q5ZMS1; -.
DR Proteomes; UP000000539; Chromosome 26.
DR Bgee; ENSGALG00000003498; Expressed in spleen and 13 other tissues.
DR ExpressionAtlas; Q5ZMS1; baseline and differential.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0005669; C:transcription factor TFIID complex; ISS:UniProtKB.
DR GO; GO:0046982; F:protein heterodimerization activity; IEA:InterPro.
DR GO; GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.
DR GO; GO:0006367; P:transcription initiation from RNA polymerase II promoter; IBA:GO_Central.
DR CDD; cd08049; TAF8; 1.
DR Gene3D; 1.10.20.10; -; 1.
DR InterPro; IPR006565; BTP.
DR InterPro; IPR009072; Histone-fold.
DR InterPro; IPR037818; TAF8.
DR InterPro; IPR019473; TFIID_su8_C.
DR PANTHER; PTHR46469; PTHR46469; 1.
DR Pfam; PF07524; Bromo_TP; 1.
DR Pfam; PF10406; TAF8_C; 1.
PE 2: Evidence at transcript level;
KW Cytoplasm; Developmental protein; Differentiation; Nucleus;
KW Reference proteome; Transcription; Transcription regulation.
FT CHAIN 1..244
FT /note="Transcription initiation factor TFIID subunit 8"
FT /id="PRO_0000315399"
FT REGION 172..244
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT MOTIF 231..244
FT /note="Nuclear localization signal"
FT /evidence="ECO:0000255"
FT COMPBIAS 202..224
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 244 AA; 27511 MW; C3C77D5643742033 CRC64;
MLQSYISEIG RSAKSYCEHT ARTQPTLSDI VVTLVEMGFN VETLPAYAKR SQRMVITAPP
VTNQPVTPKA LTAGQNKPHP SHIPGYFPEF PDPHTYIKTP TYREPVSDYQ VLREKAASQR
RDVERALTRF MAKTGETQSL FKDDVSTFPL IAARPFTVPY LTALLPSELE MQQMEETDSS
EQDDQTDTEN LPLHISTDDS GPEKENASVL QQNTSLSGSR NGEENMIDNP YLRPVKKPKI
RRKK