TAG76_CAEEL
ID TAG76_CAEEL Reviewed; 1040 AA.
AC P34681; Q7JMT0; Q9TW94;
DT 01-FEB-1994, integrated into UniProtKB/Swiss-Prot.
DT 01-FEB-1995, sequence version 2.
DT 03-AUG-2022, entry version 126.
DE RecName: Full=Putative protein tag-76;
GN Name=tag-76; ORFNames=ZK757.3;
OS Caenorhabditis elegans.
OC Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida;
OC Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae;
OC Caenorhabditis.
OX NCBI_TaxID=6239;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Bristol N2;
RX PubMed=7906398; DOI=10.1038/368032a0;
RA Wilson R., Ainscough R., Anderson K., Baynes C., Berks M., Bonfield J.,
RA Burton J., Connell M., Copsey T., Cooper J., Coulson A., Craxton M.,
RA Dear S., Du Z., Durbin R., Favello A., Fraser A., Fulton L., Gardner A.,
RA Green P., Hawkins T., Hillier L., Jier M., Johnston L., Jones M.,
RA Kershaw J., Kirsten J., Laisster N., Latreille P., Lightning J., Lloyd C.,
RA Mortimore B., O'Callaghan M., Parsons J., Percy C., Rifken L., Roopra A.,
RA Saunders D., Shownkeen R., Sims M., Smaldon N., Smith A., Smith M.,
RA Sonnhammer E., Staden R., Sulston J., Thierry-Mieg J., Thomas K.,
RA Vaudin M., Vaughan K., Waterston R., Watson A., Weinstock L.,
RA Wilkinson-Sproat J., Wohldman P.;
RT "2.2 Mb of contiguous nucleotide sequence from chromosome III of C.
RT elegans.";
RL Nature 368:32-38(1994).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA], AND ALTERNATIVE SPLICING.
RC STRAIN=Bristol N2;
RX PubMed=9851916; DOI=10.1126/science.282.5396.2012;
RG The C. elegans sequencing consortium;
RT "Genome sequence of the nematode C. elegans: a platform for investigating
RT biology.";
RL Science 282:2012-2018(1998).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=3;
CC Name=a;
CC IsoId=P34681-1; Sequence=Displayed;
CC Name=b;
CC IsoId=P34681-2; Sequence=VSP_011900;
CC Name=c;
CC IsoId=P34681-3; Sequence=VSP_011901, VSP_011902;
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DR EMBL; Z29121; CAA82389.1; -; Genomic_DNA.
DR EMBL; Z30215; CAA82389.1; JOINED; Genomic_DNA.
DR EMBL; Z29121; CAB54514.1; -; Genomic_DNA.
DR EMBL; Z30215; CAB54514.1; JOINED; Genomic_DNA.
DR EMBL; Z30215; CAB54245.1; -; Genomic_DNA.
DR PIR; D88568; D88568.
DR PIR; S41013; S41013.
DR RefSeq; NP_499191.1; NM_066790.3. [P34681-1]
DR RefSeq; NP_499192.1; NM_066791.4. [P34681-2]
DR RefSeq; NP_499193.1; NM_066792.3. [P34681-3]
DR AlphaFoldDB; P34681; -.
DR SMR; P34681; -.
DR STRING; 6239.ZK757.3a.1; -.
DR PaxDb; P34681; -.
DR PRIDE; P34681; -.
DR EnsemblMetazoa; ZK757.3a.1; ZK757.3a.1; WBGene00006449. [P34681-1]
DR EnsemblMetazoa; ZK757.3a.2; ZK757.3a.2; WBGene00006449. [P34681-1]
DR EnsemblMetazoa; ZK757.3b.1; ZK757.3b.1; WBGene00006449. [P34681-2]
DR EnsemblMetazoa; ZK757.3c.1; ZK757.3c.1; WBGene00006449. [P34681-3]
DR GeneID; 176400; -.
DR KEGG; cel:CELE_ZK757.3; -.
DR UCSC; ZK757.3b; c. elegans. [P34681-1]
DR CTD; 176400; -.
DR WormBase; ZK757.3a; CE01117; WBGene00006449; tag-76.
DR WormBase; ZK757.3b; CE24737; WBGene00006449; tag-76.
DR WormBase; ZK757.3c; CE24738; WBGene00006449; tag-76.
DR eggNOG; KOG1041; Eukaryota.
DR GeneTree; ENSGT00940000174399; -.
DR InParanoid; P34681; -.
DR OMA; ARIFCKY; -.
DR OrthoDB; 159407at2759; -.
DR PhylomeDB; P34681; -.
DR Reactome; R-CEL-203927; MicroRNA (miRNA) biogenesis.
DR Reactome; R-CEL-426486; Small interfering RNA (siRNA) biogenesis.
DR Reactome; R-CEL-5578749; Transcriptional regulation by small RNAs.
DR PRO; PR:P34681; -.
DR Proteomes; UP000001940; Chromosome III.
DR Bgee; WBGene00006449; Expressed in larva and 1 other tissue.
DR GO; GO:0005737; C:cytoplasm; ISS:WormBase.
DR GO; GO:0043186; C:P granule; ISS:WormBase.
DR GO; GO:0004521; F:endoribonuclease activity; IBA:GO_Central.
DR GO; GO:0035198; F:miRNA binding; IBA:GO_Central.
DR GO; GO:0003723; F:RNA binding; IBA:GO_Central.
DR GO; GO:0003727; F:single-stranded RNA binding; IBA:GO_Central.
DR GO; GO:0007283; P:spermatogenesis; IMP:WormBase.
DR CDD; cd04657; Piwi_ago-like; 1.
DR Gene3D; 3.30.420.10; -; 1.
DR InterPro; IPR014811; ArgoL1.
DR InterPro; IPR032472; ArgoL2.
DR InterPro; IPR032473; Argonaute_Mid_dom.
DR InterPro; IPR032474; Argonaute_N.
DR InterPro; IPR003100; PAZ_dom.
DR InterPro; IPR036085; PAZ_dom_sf.
DR InterPro; IPR003165; Piwi.
DR InterPro; IPR045246; Piwi_ago-like.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR Pfam; PF08699; ArgoL1; 1.
DR Pfam; PF16488; ArgoL2; 1.
DR Pfam; PF16487; ArgoMid; 1.
DR Pfam; PF16486; ArgoN; 1.
DR Pfam; PF02170; PAZ; 1.
DR Pfam; PF02171; Piwi; 1.
DR SMART; SM01163; DUF1785; 1.
DR SMART; SM00950; Piwi; 1.
DR SUPFAM; SSF101690; SSF101690; 1.
DR SUPFAM; SSF53098; SSF53098; 1.
DR PROSITE; PS50821; PAZ; 1.
DR PROSITE; PS50822; PIWI; 1.
PE 4: Predicted;
KW Alternative splicing; Reference proteome.
FT CHAIN 1..1040
FT /note="Putative protein tag-76"
FT /id="PRO_0000065547"
FT DOMAIN 378..486
FT /note="PAZ"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00142"
FT DOMAIN 660..966
FT /note="Piwi"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00150"
FT REGION 1..61
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 322..367
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT VAR_SEQ 19..55
FT /note="GISGSGSMSPPITSRPASGQASPLTSNGSLSPPQYAD -> EGLTSGVFSWA
FT LERLPTCLREELQLPLTDTGSCWQTN (in isoform c)"
FT /evidence="ECO:0000305"
FT /id="VSP_011901"
FT VAR_SEQ 19..21
FT /note="Missing (in isoform b)"
FT /evidence="ECO:0000305"
FT /id="VSP_011900"
FT VAR_SEQ 56..1040
FT /note="Missing (in isoform c)"
FT /evidence="ECO:0000305"
FT /id="VSP_011902"
SQ SEQUENCE 1040 AA; 115416 MW; 4C8483C1F1D72338 CRC64;
MSRRNATSFV DNNTLTSSGI SGSGSMSPPI TSRPASGQAS PLTSNGSLSP PQYADDQGSV
SYNLDSPRDL SPLLLSELAC LNMREVVARP GLGTIGRQIP VKSNFFAMDL KNPKMVVIQY
HVEIHHPGCR KLDKDEMRII FWKAVSDHPN IFHNKFALAY DGAHQLYTVA RLEFPDDQGS
VRLDCEASLP KDNRDRTRCA ISIQNVGPVL LEMQRTRTNN LDERVLTPIQ ILDIICRQSL
TCPLLKNSAN FYTWKSSCYR IPTAAGQALD LEGGKEMWTG FFSSAHIASN YRPLLNIDVA
HTAFYKTRIT VLQFMCDVLN ERTSKPNRNN PRGPGGPGGP GGYRGGRGGG RGGSYGNFGN
RGPPGANVRD DFGGNGLTFT MDTLSRDTQL SSFETRIFGD AIRGMKIRAA HRPNAIRVYK
VNSLQLPADK LMFQGIDEEG RQVVCSVADY FSEKYGPLKY PKLPCLHVGP PTRNIFLPME
HCLIDSPQKY NKKMSEKQTS AIIKAAAVDA TQREDRIKQL AAQASFGTDP FLKEFGVAVS
SQMIQTTARV IQPPPIMFGG NNRSVNPVVF PKDGSWTMDN QTLYMPATCR SYSMIALVDP
RDQTSLQTFC QSLTMKATAM GMNFPRWPDL VKYGRSKEDV CTLFTEIADE YRVTNTVCDC
IIVVLQSKNS DIYMTVKEQS DIVHGIMSQC VLMKNVSRPT PATCANIVLK LNMKMGGINS
RIVADKITNK YLVDQPTMVV GIDVTHPTQA EMRMNMPSVA AIVANVDLLP QSYGANVKVQ
KKCRESVVYL LDAIRERIIT FYRHTKQKPA RIIVYRDGVS EGQFSEVLRE EIQSIRTACL
AIAEDFRPPI TYIVVQKRHH ARIFCKYQND MVGKAKNVPP GTTVDTGIVS PEGFDFYLCS
HYGVQGTSRP ARYHVLLDEC KFTADEIQSI TYGMCHTYGR CTRSVSIPTP VYYADLVATR
ARCHVKRKLG LADNNDCDTN SRSSTLASLL NVRTGSGKGK KSYAPSVDDE SYSLSDATSD
QILQDCVSVA TDFKSRMYFI