TALD3_DANRE
ID TALD3_DANRE Reviewed; 1554 AA.
AC H6D7E6; F1R2W6;
DT 28-NOV-2012, integrated into UniProtKB/Swiss-Prot.
DT 18-APR-2012, sequence version 1.
DT 03-AUG-2022, entry version 31.
DE RecName: Full=Protein TALPID3;
GN Name=talpid3;
OS Danio rerio (Zebrafish) (Brachydanio rerio).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Danionidae; Danioninae; Danio.
OX NCBI_TaxID=7955;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA], DEVELOPMENTAL STAGE, SUBCELLULAR LOCATION,
RP DISRUPTION PHENOTYPE, AND FUNCTION.
RC STRAIN=AB, and Singapore;
RX PubMed=22028029; DOI=10.1242/dev.070862;
RA Ben J., Elworthy S., Ng A.S., van Eeden F., Ingham P.W.;
RT "Targeted mutation of the talpid3 gene in zebrafish reveals its conserved
RT requirement for ciliogenesis and Hedgehog signalling across the
RT vertebrates.";
RL Development 138:4969-4978(2011).
CC -!- FUNCTION: Required for ciliogenesis and sonic hedgehog/SHH signaling.
CC {ECO:0000269|PubMed:22028029}.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton, cilium basal body
CC {ECO:0000269|PubMed:22028029}. Cytoplasm, cytoskeleton, microtubule
CC organizing center, centrosome, centriole {ECO:0000269|PubMed:22028029}.
CC -!- DEVELOPMENTAL STAGE: Ubiquitously distributed in embryos from early
CC cleavage stages through to 2 dpf. {ECO:0000269|PubMed:22028029}.
CC -!- DISRUPTION PHENOTYPE: Homozygous for these mutant alleles complete
CC embryogenesis normally, but manifest a cystic kidney phenotype during
CC the early larval stages and die within a month of hatching. Elimination
CC of maternally derived talpid3 activity by germline replacement resulted
CC in embryonic lethality of talpid3 homozygotes. The phenotype of such
CC maternal and zygotic mutant show absence of primary and motile cilia as
CC well as aberrant Hedgehog signaling. {ECO:0000269|PubMed:22028029}.
CC -!- SIMILARITY: Belongs to the TALPID3 family. {ECO:0000305}.
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DR EMBL; JN088213; AEH76002.1; -; mRNA.
DR RefSeq; NP_001245157.1; NM_001258228.1.
DR AlphaFoldDB; H6D7E6; -.
DR SMR; H6D7E6; -.
DR STRING; 7955.ENSDARP00000129806; -.
DR PaxDb; H6D7E6; -.
DR GeneID; 100884142; -.
DR KEGG; dre:100884142; -.
DR ZFIN; ZDB-GENE-120119-1; si:ch211-185a18.2.
DR eggNOG; ENOG502QUXJ; Eukaryota.
DR InParanoid; H6D7E6; -.
DR OrthoDB; 66287at2759; -.
DR PRO; PR:H6D7E6; -.
DR Proteomes; UP000000437; Genome assembly.
DR Proteomes; UP000814640; Unplaced.
DR GO; GO:0005814; C:centriole; IDA:UniProtKB.
DR GO; GO:0036064; C:ciliary basal body; IDA:UniProtKB.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0060271; P:cilium assembly; IMP:ZFIN.
DR GO; GO:0035845; P:photoreceptor cell outer segment organization; IMP:ZFIN.
DR GO; GO:0007224; P:smoothened signaling pathway; IMP:ZFIN.
DR InterPro; IPR029246; TALPID3.
DR PANTHER; PTHR15721; PTHR15721; 1.
DR Pfam; PF15324; TALPID3; 1.
PE 2: Evidence at transcript level;
KW Cell projection; Cilium biogenesis/degradation; Coiled coil; Cytoplasm;
KW Cytoskeleton; Reference proteome.
FT CHAIN 1..1554
FT /note="Protein TALPID3"
FT /id="PRO_0000420183"
FT REGION 57..84
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 227..247
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 312..396
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 411..466
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 489..523
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 553..639
FT /note="Required for centrosomal localization"
FT /evidence="ECO:0000250"
FT REGION 639..687
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1079..1178
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1214..1265
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1354..1374
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 1500..1554
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 204..270
FT /evidence="ECO:0000255"
FT COILED 556..586
FT /evidence="ECO:0000255"
FT COMPBIAS 358..396
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 412..466
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 493..508
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1079..1098
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1099..1113
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1119..1134
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1147..1173
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1226..1240
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1241..1265
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 1529..1554
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 1554 AA; 167601 MW; E45FBDFACE8F41EE CRC64;
MDSCCVSVNN KTHFNDSTSS SDAADVLIHS TRAGRDEIQD KSQNKVNIYI RRLSDSEHVH
SADERRTEIP PVNLPTASDT AGPEEPLAGI KSNQFAGLFG KTSRKEKSKA QSTIMQTEQL
KSKGEDVQIS TFSADGRGVV SAALRKRSQG APIRRNVTVQ VLDQDRSQTP AGVQPDPAFP
LGDPGTSASV AAITAATLAA TAPLMKAQSE MEAQISRVSA ELKRLQAAEG SVPPGRTART
DSSSAGRAAH LEEQLNILIQ QRLQHLETIQ CQQIQLQNRL LGSALDVVAS RGNSSGVSQT
DSLPLQISGN RSIRLSATDN PSAGRPASVS MDVYRERQTG GHKSPLETPA PRKVIPKPTH
WTSSTSTNRP PKSSFKNQGN GRLQDQSPNN RRSPERCALQ SVGVERFAMA TADNSQPEQS
RESQMPSKAS VTRSAQEDGS SFVNGQNEQE RQGEPTNVSS SSTTVQKASE MLQDLGRLKN
EMRSLLQTAD AFPVPNAKST QSSRSRHLAP VATAPPPATA PISMPPEPVD VIAVRAAALN
RASVLKSIQP PTSMFEDAGL VLRQVRQSKK TLEENLEAIL RAKDGEVLHT QLEALSKNRD
VREELRIKKT VDAWINTLSK EIQDDLARES SERIVDAAVS RREAGQRTRA EASAAAKKTS
VRAQAGNTRA HTRQPAPAVR NKPAVKQEAT QPIVLKSQDD EEYLARLYGK AIYDGQRRTL
KKSPYLRFNS PTPKSKPQRP KIVETVKGVK MKSSKTQTSQ YVGDVSAMQH SVSEPHFIFS
PSDPDKQQQQ PGSPVRGYLI PMAIPLGKPR VDCQPPVPSR VIITDKPAIV TTSFPPITVV
ESKPTPAIRK PNAILLEVQS APKKRTPQLQ IQVQPGVNIE SALCSSRQAS PTPVIPAESI
LPPPSIHATE DPHAHEDQQE NIFPGTNFLA QADISQETNG GLPDSPIEFK GLPSPPADLY
HGPVFPPVPT QSTPLTEPIL NTIQQRETLE NRLVDWVEQQ IMARVITGMF PQPAQADPVH
QSEPENSVAS DIVEAAGGSG LQLFVDTGVP VDSEVIRHYV NEVLTEIIAS MLGQREAQGT
PATLVQTQDA QKEDTTVPTP APTPEPSLKD PPSPVRTPDL SEHLSTATSP EKPPQESASP
GPDRIPVGTP ITTPIPSPTR VATPSPPTPA NQSPEPGSLQ IHLWEGSELP LEEEEQPELQ
PAPVVISVPR VDDQEESVIH PSSPVLSKPQ SPPAPPLPPV IQKSESSSSS SSSSSESSCS
SSVTVTETET AARHISEGEL LLNHGQMAAV RVLEQEGVLL PNFMTSLNGS LHGVQDMDYD
PPSEGQVIRA PHLPAHHDPV LSLLARMELG PISQSQQPEG WWEEESSGEV SEGQRPVLTA
AEEIVLTGHS LMDQQTIRQS RNTQISPHAT LTSPGQVIAE HTGAVVEDGG LSVNLRSSDE
QKEAMVYQAD TVSSPQPESS QMAQTVHRPA PILVRQYEEE PDFPQLRRLS DDAFFGADEK
GEDTFLHTGE GGGGGRGSDV RVMSVRLPSV KQDQESVSLS SVEGDTDSSA NDVF