BPS1_ARATH
ID BPS1_ARATH Reviewed; 349 AA.
AC Q9LMM6;
DT 14-OCT-2008, integrated into UniProtKB/Swiss-Prot.
DT 01-OCT-2000, sequence version 1.
DT 03-AUG-2022, entry version 99.
DE RecName: Full=Protein BPS1, chloroplastic;
DE AltName: Full=Protein BYPASS 1;
DE Flags: Precursor;
GN Name=BPS1; OrderedLocusNames=At1g01550; ORFNames=F22L4.9;
OS Arabidopsis thaliana (Mouse-ear cress).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis.
OX NCBI_TaxID=3702;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Stracke R., Palme K.;
RT "Signal peptide selection derived cDNAs from Arabidopsis thaliana leaves
RT and guard cells.";
RL Submitted (AUG-1998) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. Columbia;
RX PubMed=11130712; DOI=10.1038/35048500;
RA Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O.,
RA Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E.,
RA Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K., Conn L.,
RA Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P.,
RA Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D.,
RA Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J.,
RA Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L.,
RA Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A.,
RA Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A.,
RA Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M.,
RA Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M.,
RA Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P.,
RA Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D.,
RA Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D.,
RA Yu G., Fraser C.M., Venter J.C., Davis R.W.;
RT "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.";
RL Nature 408:816-820(2000).
RN [3]
RP GENOME REANNOTATION.
RC STRAIN=cv. Columbia;
RX PubMed=27862469; DOI=10.1111/tpj.13415;
RA Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S.,
RA Town C.D.;
RT "Araport11: a complete reannotation of the Arabidopsis thaliana reference
RT genome.";
RL Plant J. 89:789-804(2017).
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC STRAIN=cv. Columbia;
RX PubMed=14593172; DOI=10.1126/science.1088305;
RA Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M.,
RA Wu H.C., Kim C.J., Nguyen M., Pham P.K., Cheuk R.F., Karlin-Newmann G.,
RA Liu S.X., Lam B., Sakano H., Wu T., Yu G., Miranda M., Quach H.L.,
RA Tripp M., Chang C.H., Lee J.M., Toriumi M.J., Chan M.M., Tang C.C.,
RA Onodera C.S., Deng J.M., Akiyama K., Ansari Y., Arakawa T., Banh J.,
RA Banno F., Bowser L., Brooks S.Y., Carninci P., Chao Q., Choy N., Enju A.,
RA Goldsmith A.D., Gurjal M., Hansen N.F., Hayashizaki Y., Johnson-Hopson C.,
RA Hsuan V.W., Iida K., Karnes M., Khan S., Koesema E., Ishida J., Jiang P.X.,
RA Jones T., Kawai J., Kamiya A., Meyers C., Nakajima M., Narusaka M.,
RA Seki M., Sakurai T., Satou M., Tamse R., Vaysberg M., Wallender E.K.,
RA Wong C., Yamamura Y., Yuan S., Shinozaki K., Davis R.W., Theologis A.,
RA Ecker J.R.;
RT "Empirical analysis of transcriptional activity in the Arabidopsis
RT genome.";
RL Science 302:842-846(2003).
RN [5]
RP IDENTIFICATION, FUNCTION, AND TISSUE SPECIFICITY.
RX PubMed=15458645; DOI=10.1016/j.cub.2004.09.045;
RA Van Norman J.M., Frederick R.L., Sieburth L.E.;
RT "BYPASS1 negatively regulates a root-derived signal that controls plant
RT architecture.";
RL Curr. Biol. 14:1739-1746(2004).
RN [6]
RP FUNCTION.
RX PubMed=17217459; DOI=10.1111/j.1365-313x.2006.02982.x;
RA Van Norman J.M., Sieburth L.E.;
RT "Dissecting the biosynthetic pathway for the bypass1 root-derived signal.";
RL Plant J. 49:619-628(2007).
CC -!- FUNCTION: Required for normal root and shoot development. Prevents
CC constitutive production of a root mobile carotenoid-derived signaling
CC compound that is capable of arresting shoot and leaf development.
CC {ECO:0000269|PubMed:15458645, ECO:0000269|PubMed:17217459}.
CC -!- SUBCELLULAR LOCATION: Plastid, chloroplast {ECO:0000305}.
CC -!- TISSUE SPECIFICITY: Expressed in roots, hypocotyls, cotyledons, leaves,
CC flowers and siliques. {ECO:0000269|PubMed:15458645}.
CC -!- MISCELLANEOUS: The mobile signal produced in absence of BPS1 is neither
CC abscisic acid nor the MAX-dependent hormone.
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DR EMBL; AF083676; AAN60235.1; -; mRNA.
DR EMBL; AC061957; AAF81313.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE27303.1; -; Genomic_DNA.
DR EMBL; CP002684; AEE27304.1; -; Genomic_DNA.
DR EMBL; AF349532; AAK15579.1; -; mRNA.
DR EMBL; AY059805; AAL24287.1; -; mRNA.
DR EMBL; AY063906; AAL36262.1; -; mRNA.
DR EMBL; AY091197; AAM14136.1; -; mRNA.
DR EMBL; BT000041; AAN15360.1; -; mRNA.
DR PIR; B86146; B86146.
DR RefSeq; NP_001030929.1; NM_001035852.3.
DR RefSeq; NP_563630.1; NM_100037.4.
DR AlphaFoldDB; Q9LMM6; -.
DR SMR; Q9LMM6; -.
DR STRING; 3702.AT1G01550.1; -.
DR iPTMnet; Q9LMM6; -.
DR PaxDb; Q9LMM6; -.
DR PRIDE; Q9LMM6; -.
DR ProteomicsDB; 240359; -.
DR EnsemblPlants; AT1G01550.1; AT1G01550.1; AT1G01550.
DR EnsemblPlants; AT1G01550.2; AT1G01550.2; AT1G01550.
DR GeneID; 839536; -.
DR Gramene; AT1G01550.1; AT1G01550.1; AT1G01550.
DR Gramene; AT1G01550.2; AT1G01550.2; AT1G01550.
DR KEGG; ath:AT1G01550; -.
DR Araport; AT1G01550; -.
DR TAIR; locus:2025406; AT1G01550.
DR eggNOG; ENOG502QPVM; Eukaryota.
DR HOGENOM; CLU_034894_0_0_1; -.
DR InParanoid; Q9LMM6; -.
DR OMA; CETHNGI; -.
DR OrthoDB; 816771at2759; -.
DR PhylomeDB; Q9LMM6; -.
DR PRO; PR:Q9LMM6; -.
DR Proteomes; UP000006548; Chromosome 1.
DR ExpressionAtlas; Q9LMM6; baseline and differential.
DR Genevisible; Q9LMM6; AT.
DR GO; GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
DR GO; GO:0009793; P:embryo development ending in seed dormancy; IGI:TAIR.
DR GO; GO:0048364; P:root development; IMP:TAIR.
DR GO; GO:0048367; P:shoot system development; IMP:TAIR.
DR InterPro; IPR004320; BPS1_pln.
DR Pfam; PF03087; DUF241; 1.
PE 2: Evidence at transcript level;
KW Chloroplast; Plastid; Reference proteome; Transit peptide.
FT TRANSIT 1..43
FT /note="Chloroplast"
FT /evidence="ECO:0000255"
FT CHAIN 44..349
FT /note="Protein BPS1, chloroplastic"
FT /id="PRO_0000352246"
SQ SEQUENCE 349 AA; 38584 MW; 7C0FF28E4BD05284 CRC64;
MARPQDPPRG FFPFGNPFKN LSSKNSVLSS KLLPLLNNFE TNLASSISKL VPKEKSDILT
VSWMKQAMES LCETHNGIKT LITDLELPVS DWEDKWVDVY LDISVKLLDL CNAFSSELTR
LNQGHLLLQF ALHNLEANSP QNLSKAQSSL DSWKQHIVSK NPRIENCRAI LSSLVQTLNL
PKVKNSAKGK VLMRALYGVK VKTLYISGVF AAAFSGSSQN LMYLTVSNEL PWAQSFMEVQ
NTMNAEIKNI FLSDGLTVLK ELEAVASGVK KLYPAIQQGS IDPISLQPLK DSVTELSNGI
DLVSKEVDCF FKILLSGRDT LLENLRSMGA STLQATSPKK AAGKNYRGF
