TB1RB_XENLA
ID TB1RB_XENLA Reviewed; 522 AA.
AC Q6GPC6;
DT 24-JAN-2006, integrated into UniProtKB/Swiss-Prot.
DT 19-JUL-2004, sequence version 1.
DT 03-AUG-2022, entry version 93.
DE RecName: Full=F-box-like/WD repeat-containing protein TBL1XR1-B;
DE AltName: Full=Nuclear receptor corepressor/HDAC3 complex subunit TBLR1-B;
DE AltName: Full=TBL1-related protein 1-B;
DE AltName: Full=Transducin beta-like 1X-related homolog 1-B;
GN Name=tbl1xr1-b; Synonyms=tblr1;
OS Xenopus laevis (African clawed frog).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus.
OX NCBI_TaxID=8355;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Embryo;
RG NIH - Xenopus Gene Collection (XGC) project;
RL Submitted (JUN-2004) to the EMBL/GenBank/DDBJ databases.
CC -!- FUNCTION: F-box-like protein which acts as an integral component of the
CC N-CoR transcriptional corepressor complex. Probably regulates
CC transcription activation mediated by nuclear receptors. May mediate the
CC recruitment of the 19S proteasome complex, leading to the subsequent
CC proteasomal degradation of the N-CoR complex, thereby allowing cofactor
CC exchange and transcription activation (By similarity). {ECO:0000250}.
CC -!- SUBUNIT: Interacts with heterodimers of rxra and thrb, and this
CC interaction is abrogated by thyroid hormone binding to thrb. Interacts
CC with ncor1 (By similarity). {ECO:0000250}.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000250}.
CC -!- DOMAIN: The F-box-like domain is related to the F-box domain, and also
CC functions to recruit ubiquitin E3 ligase complexes. {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the WD repeat EBI family. {ECO:0000305}.
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DR EMBL; BC073215; AAH73215.1; -; mRNA.
DR RefSeq; NP_001090456.1; NM_001096987.1.
DR RefSeq; XP_018120115.1; XM_018264626.1.
DR AlphaFoldDB; Q6GPC6; -.
DR SMR; Q6GPC6; -.
DR DNASU; 779369; -.
DR GeneID; 779369; -.
DR KEGG; xla:779369; -.
DR CTD; 779369; -.
DR Xenbase; XB-GENE-864821; tbl1xr1.S.
DR OMA; XTGALVH; -.
DR OrthoDB; 1463197at2759; -.
DR Proteomes; UP000186698; Chromosome 5S.
DR Bgee; 779369; Expressed in blastula and 19 other tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0003714; F:transcription corepressor activity; IEA:InterPro.
DR GO; GO:0006325; P:chromatin organization; IEA:UniProtKB-KW.
DR GO; GO:0016575; P:histone deacetylation; IEA:InterPro.
DR Gene3D; 2.130.10.10; -; 1.
DR InterPro; IPR045183; Ebi-like.
DR InterPro; IPR020472; G-protein_beta_WD-40_rep.
DR InterPro; IPR006594; LisH.
DR InterPro; IPR015943; WD40/YVTN_repeat-like_dom_sf.
DR InterPro; IPR001680; WD40_repeat.
DR InterPro; IPR019775; WD40_repeat_CS.
DR InterPro; IPR036322; WD40_repeat_dom_sf.
DR PANTHER; PTHR22846; PTHR22846; 1.
DR Pfam; PF08513; LisH; 1.
DR Pfam; PF00400; WD40; 6.
DR PRINTS; PR00320; GPROTEINBRPT.
DR SMART; SM00667; LisH; 1.
DR SMART; SM00320; WD40; 8.
DR SUPFAM; SSF50978; SSF50978; 1.
DR PROSITE; PS50896; LISH; 1.
DR PROSITE; PS00678; WD_REPEATS_1; 4.
DR PROSITE; PS50082; WD_REPEATS_2; 6.
DR PROSITE; PS50294; WD_REPEATS_REGION; 1.
PE 2: Evidence at transcript level;
KW Activator; Chromatin regulator; Nucleus; Reference proteome; Repeat;
KW Repressor; Transcription; Transcription regulation;
KW Ubl conjugation pathway; WD repeat.
FT CHAIN 1..522
FT /note="F-box-like/WD repeat-containing protein TBL1XR1-B"
FT /id="PRO_0000051269"
FT DOMAIN 4..36
FT /note="LisH"
FT /evidence="ECO:0000255|PROSITE-ProRule:PRU00126"
FT DOMAIN 41..86
FT /note="F-box-like"
FT REPEAT 175..214
FT /note="WD 1"
FT REPEAT 231..270
FT /note="WD 2"
FT REPEAT 272..311
FT /note="WD 3"
FT REPEAT 314..352
FT /note="WD 4"
FT REPEAT 355..394
FT /note="WD 5"
FT REPEAT 397..445
FT /note="WD 6"
FT REPEAT 448..487
FT /note="WD 7"
FT REPEAT 489..522
FT /note="WD 8"
FT REGION 122..150
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 122..147
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 522 AA; 56285 MW; 4FB0F58F503B461F CRC64;
MSISSDEVNF LVYRYLQESG FSHSAFTFGI ESHISQSNIN GALVPPAALI SIIQKGLQYV
EAEVSINEDG TLFDGRPIES LSLIDAVMPD VVQTRQQAYR DKLAQQQQAA AAAAAAAAAA
AATSANNQQP PAKNGESTAN GEENGGHALA NNHTDMMEVD GDVEIPPSKA VVLRGHESEV
FICAWNPVSD LLASGSGDST ARIWNLSENS TSGSTQLVLR HCIREGGQDV PSNKDVTSLD
WNSEGTLLAT GSYDGFARIW TKDGNLASTL GQHKGPIFAL KWNKKGNFIL SAGVDKTTII
WDAHTGEAKQ QFPFHSAPAL DVDWQSNNTF ASCSTDMCIH VCKLGQDRPI KTFQGHTNEV
NAIKWDPTGN LLASCSDDMT LKIWSMKHDT CVHDLQAHNK EIYTIKWSPT GPGTNNPNAN
LMLASASFDS TVRLWDVDRG ICIHTLTKHQ EPVYSVAFSP DGRYLASGSF DKCVHIWNTQ
TGALVHSYRG TGGIFEVCWN AAGDKVGASA SDGSVCVLDL RK