TBA1_CHLRE
ID TBA1_CHLRE Reviewed; 451 AA.
AC P09204; P94006;
DT 01-JUL-1989, integrated into UniProtKB/Swiss-Prot.
DT 01-JUL-1989, sequence version 1.
DT 03-AUG-2022, entry version 129.
DE RecName: Full=Tubulin alpha-1 chain;
GN Name=TUBA1;
OS Chlamydomonas reinhardtii (Chlamydomonas smithii).
OC Eukaryota; Viridiplantae; Chlorophyta; core chlorophytes; Chlorophyceae;
OC CS clade; Chlamydomonadales; Chlamydomonadaceae; Chlamydomonas.
OX NCBI_TaxID=3055;
RN [1]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA].
RX PubMed=3855249; DOI=10.1128/mcb.5.9.2389-2398.1985;
RA Silflow C.D., Chisholm R.L., Conner T.W., Ranum L.P.W.;
RT "The two alpha-tubulin genes of Chlamydomonas reinhardi code for slightly
RT different proteins.";
RL Mol. Cell. Biol. 5:2389-2398(1985).
RN [2]
RP NUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-15.
RX PubMed=6738533; DOI=10.1128/mcb.4.6.1115-1124.1984;
RA Brunke K.J., Anthony J.G., Sternberg E.J., Weeks D.P.;
RT "Repeated consensus sequence and pseudopromoters in the four coordinately
RT regulated tubulin genes of Chlamydomonas reinhardi.";
RL Mol. Cell. Biol. 4:1115-1124(1984).
RN [3]
RP ACETYLATION AT LYS-40.
RX PubMed=2441392; DOI=10.1073/pnas.84.16.5720;
RA Ledizet M., Piperno G.;
RT "Identification of an acetylation site of Chlamydomonas alpha-tubulin.";
RL Proc. Natl. Acad. Sci. U.S.A. 84:5720-5724(1987).
CC -!- FUNCTION: Tubulin is the major constituent of microtubules. It binds
CC two moles of GTP, one at an exchangeable site on the beta chain and one
CC at a non-exchangeable site on the alpha chain.
CC -!- SUBUNIT: Dimer of alpha and beta chains. A typical microtubule is a
CC hollow water-filled tube with an outer diameter of 25 nm and an inner
CC diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to
CC form protofilaments running lengthwise along the microtubule wall with
CC the beta-tubulin subunit facing the microtubule plus end conferring a
CC structural polarity. Microtubules usually have 13 protofilaments but
CC different protofilament numbers can be found in some organisms and
CC specialized cells.
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytoskeleton.
CC -!- PTM: Undergoes a tyrosination/detyrosination cycle, the cyclic removal
CC and re-addition of a C-terminal tyrosine residue by the enzymes tubulin
CC tyrosine carboxypeptidase (TTCP) and tubulin tyrosine ligase (TTL),
CC respectively. {ECO:0000250}.
CC -!- PTM: Acetylation of alpha chains at Lys-40 stabilizes microtubules and
CC affects affinity and processivity of microtubule motors. This
CC modification has a role in multiple cellular functions, ranging from
CC cell motility, cell cycle progression or cell differentiation to
CC intracellular trafficking and signaling (By similarity). {ECO:0000250}.
CC -!- SIMILARITY: Belongs to the tubulin family. {ECO:0000305}.
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DR EMBL; M11447; AAA33095.1; -; Genomic_DNA.
DR EMBL; K01805; AAA33096.1; -; Genomic_DNA.
DR PIR; A53298; A53298.
DR RefSeq; XP_001691876.1; XM_001691824.1.
DR RefSeq; XP_001703110.1; XM_001703058.1.
DR PDB; 6U42; EM; 3.40 A; 0B/0F/0H/0J/0L/0N/0P/0R/0V/0X/0Z/1B/1D/1F/1H/1L/1N/1P/1R/1T/1V/1X/1Z/2/2B/2D/2F/2H/2J/2L=1-451.
DR PDB; 6VE7; EM; 3.60 A; 0/1/5/6/7/D/E/F/G/L/M/P/S/X/Y/Z/e/f/h/k/m/o/s/y=1-451.
DR PDB; 7JU4; EM; 3.40 A; 7/9/D/H/J/L/P/R/T/X/Z/j/t/z=1-451.
DR PDB; 7KZM; EM; 7.50 A; A2/A4/A6/B2/B4/B6=1-451.
DR PDB; 7KZO; EM; 3.30 A; A2/A4/A6/B2/B4/B6=1-451.
DR PDB; 7SOM; EM; 3.70 A; AB/AD/AF/AH/AJ/AL/BB/BD/BF/BH/BJ/BL/CB/CD/CF/CH/CJ/DB/DD/DF/DH/DJ/DL/EB/ED/EF/EH/EJ/EL/FB=1-451.
DR PDB; 7SQC; EM; 3.80 A; NB/ND/NF/NH/NJ/NL/NN/OD/OF/OH/OJ/OL/ON/OP/PD/PF/PH/PJ/PL/PN/PP/QD/QF/QH/QJ/QL/QN/QP/RD/RF=1-451.
DR PDBsum; 6U42; -.
DR PDBsum; 6VE7; -.
DR PDBsum; 7JU4; -.
DR PDBsum; 7KZM; -.
DR PDBsum; 7KZO; -.
DR PDBsum; 7SOM; -.
DR PDBsum; 7SQC; -.
DR AlphaFoldDB; P09204; -.
DR SMR; P09204; -.
DR STRING; 3055.EDO96640; -.
DR iPTMnet; P09204; -.
DR ProMEX; P09204; -.
DR EnsemblPlants; PNW83770; PNW83770; CHLRE_04g216850v5.
DR EnsemblPlants; PNW85531; PNW85531; CHLRE_03g190950v5.
DR GeneID; 5717531; -.
DR GeneID; 5728641; -.
DR Gramene; PNW83770; PNW83770; CHLRE_04g216850v5.
DR Gramene; PNW85531; PNW85531; CHLRE_03g190950v5.
DR KEGG; cre:CHLRE_03g190950v5; -.
DR KEGG; cre:CHLRE_04g216850v5; -.
DR eggNOG; KOG1376; Eukaryota.
DR HOGENOM; CLU_015718_0_0_1; -.
DR OMA; KVGICYQ; -.
DR OrthoDB; 514396at2759; -.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0005874; C:microtubule; IEA:UniProtKB-KW.
DR GO; GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
DR GO; GO:0005200; F:structural constituent of cytoskeleton; IEA:InterPro.
DR GO; GO:0007017; P:microtubule-based process; IEA:InterPro.
DR Gene3D; 1.10.287.600; -; 1.
DR Gene3D; 3.30.1330.20; -; 1.
DR Gene3D; 3.40.50.1440; -; 1.
DR InterPro; IPR002452; Alpha_tubulin.
DR InterPro; IPR008280; Tub_FtsZ_C.
DR InterPro; IPR000217; Tubulin.
DR InterPro; IPR037103; Tubulin/FtsZ-like_C.
DR InterPro; IPR018316; Tubulin/FtsZ_2-layer-sand-dom.
DR InterPro; IPR036525; Tubulin/FtsZ_GTPase_sf.
DR InterPro; IPR023123; Tubulin_C.
DR InterPro; IPR017975; Tubulin_CS.
DR InterPro; IPR003008; Tubulin_FtsZ_GTPase.
DR PANTHER; PTHR11588; PTHR11588; 1.
DR Pfam; PF00091; Tubulin; 1.
DR Pfam; PF03953; Tubulin_C; 1.
DR PRINTS; PR01162; ALPHATUBULIN.
DR PRINTS; PR01161; TUBULIN.
DR SMART; SM00864; Tubulin; 1.
DR SMART; SM00865; Tubulin_C; 1.
DR SUPFAM; SSF52490; SSF52490; 1.
DR SUPFAM; SSF55307; SSF55307; 1.
DR PROSITE; PS00227; TUBULIN; 1.
PE 1: Evidence at protein level;
KW 3D-structure; Acetylation; Cytoplasm; Cytoskeleton; GTP-binding;
KW Microtubule; Nucleotide-binding.
FT CHAIN 1..451
FT /note="Tubulin alpha-1 chain"
FT /id="PRO_0000048154"
FT BINDING 142..148
FT /ligand="GTP"
FT /ligand_id="ChEBI:CHEBI:37565"
FT /evidence="ECO:0000255"
FT SITE 451
FT /note="Involved in polymerization"
FT MOD_RES 40
FT /note="N6-acetyllysine"
FT /evidence="ECO:0000269|PubMed:2441392"
SQ SEQUENCE 451 AA; 49586 MW; 3A26857C19C2A565 CRC64;
MREVISIHIG QAGIQVGNAC WELYCLEHGI QPDGQMPSDK TIGGGDDAFN TFFSETGAGK
HVPRCIFLDL EPTVVDEVRT GTYRQLFHPE QLISGKEDAA NNFARGHYTI GKEIVDLALD
RIRKLADNCT GLQGFLVFNA VGGGTGSGLG SLLLERLSVD YGKKSKLGFT VYPSPQVSTA
VVEPYNSVLS THSLLEHTDV AVMLDNEAIY DICRRSLDIE RPTYTNLNRL IAQVISSLTA
SLRFDGALNV DITEFQTNLV PYPRIHFMLS SYAPIISAEK AYHEQLSVAE ITNAAFEPAS
MMVKCDPRHG KYMACCLMYR GDVVPKDVNA SVATIKTKRT IQFVDWCPTG FKCGINYQPP
TVVPGGDLAK VQRAVCMISN STAIGEIFSR LDHKFDLMYA KRAFVHWYVG EGMEEGEFSE
AREDLAALEK DFEEVGAESA EGAGEGEGEE Y